RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 NRBP1Q9UHY1 535 aa5.56□□□□□ -1.52
CSMD3-208ENST00000497026 PCDHA8Q9Y5H6 950 aa5.56□□□□□ -1.52
CSMD3-208ENST00000497026 TRBV23-1A0A0A0MS06 115 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.55□□□□□ -1.52
CSMD3-208ENST00000497026 MYADML2A6NDP7 307 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 GOLGA6L6A8MZA4 724 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 PLEKHA8P1O95397 391 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 SRGAP2CP0DJJ0 459 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 AKR1A1P14550 325 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 CPA1P15085 419 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 LIFRP42702 1097 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 MAGEA10P43363 369 aaPredicted RBP5.55□□□□□ -1.52
CSMD3-208ENST00000497026 TNNT3P45378 269 aaPredicted RBP5.55□□□□□ -1.52
CSMD3-208ENST00000497026 RPS6P62753 249 aaKnown RBP5.55□□□□□ -1.52
CSMD3-208ENST00000497026 EXOSC10Q01780 885 aaKnown RBP5.55□□□□□ -1.52
CSMD3-208ENST00000497026 GHRHRQ02643 423 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 ACVR2BQ13705 512 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 BAATQ14032 418 aaPredicted RBP5.55□□□□□ -1.52
CSMD3-208ENST00000497026 PUM1Q14671 1186 aaKnown RBP eCLIP5.55□□□□□ -1.52
CSMD3-208ENST00000497026 SART3Q15020 963 aaKnown RBP5.55□□□□□ -1.52
CSMD3-208ENST00000497026 SKIDA1Q1XH10 827 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 CCDC144BQ3MJ40 725 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 TMEM63BQ5T3F8 832 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 GJC2Q5T442 439 aaPredicted RBP5.55□□□□□ -1.52
CSMD3-208ENST00000497026 CASC1Q6TDU7 716 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 LRSAM1Q6UWE0 723 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 RNF207Q6ZRF8 634 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 NECAB2Q7Z6G3 386 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 MTDHQ86UE4 582 aaKnown RBP5.55□□□□□ -1.52
CSMD3-208ENST00000497026 SGMS1Q86VZ5 419 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 HOMER1Q86YM7 354 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 RAB11FIP4Q86YS3 637 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 KBTBD2Q8IY47 623 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 STPG3Q8N7X2 389 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 DTX3Q8N9I9 347 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 FAM184AQ8NB25 1140 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 SH3RF2Q8TEC5 729 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 NUP133Q8WUM0 1156 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 ANKRD7Q92527 254 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 NEK1Q96PY6 1258 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 PIGSQ96S52 555 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 ABHD16BQ9H3Z7 469 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 VAT1LQ9HCJ6 419 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 ST6GALNAC2Q9UJ37 374 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 SNX14Q9Y5W7 946 aa5.55□□□□□ -1.52
CSMD3-208ENST00000497026 SYNRGQ9UMZ2 1314 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 TCHHQ07283 1943 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 PTPDC1A2A3K4 754 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 ACOT7O00154 380 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 DNM1LO00429 736 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 KCNK3O14649 394 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 ZBTB5O15062 677 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 CTAGE5O15320 804 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 DHX16O60231 1041 aaKnown RBP5.54□□□□□ -1.52
CSMD3-208ENST00000497026 B4GALT4O60513 344 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 BAG4O95429 457 aaKnown RBP5.54□□□□□ -1.52
CSMD3-208ENST00000497026 PGK1P00558 417 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 KRT15P19012 456 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 EDNRBP24530 442 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 CALML3P27482 149 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 ADCYAP1R1P41586 468 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 PFKPQ01813 784 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 LRRC41Q15345 812 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 LRRC26Q2I0M4 334 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 HABP4Q5JVS0 413 aaKnown RBP5.54□□□□□ -1.52
CSMD3-208ENST00000497026 CD276Q5ZPR3 534 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 CCSAPQ6IQ19 270 aaPredicted RBP5.54□□□□□ -1.52
CSMD3-208ENST00000497026 TAPT1Q6NXT6 567 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 CAVIN1Q6NZI2 390 aaKnown RBP5.54□□□□□ -1.52
CSMD3-208ENST00000497026 APOA5Q6Q788 366 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 GLB1LQ6UWU2 654 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 CATIPQ7Z7H3 387 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 MICU3Q86XE3 530 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 SCUBE1Q8IWY4 988 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 FBXO16Q8IX29 292 aaPredicted RBP5.54□□□□□ -1.52
CSMD3-208ENST00000497026 SRBD1Q8N5C6 995 aaKnown RBP5.54□□□□□ -1.52
CSMD3-208ENST00000497026 EXOC2Q96KP1 924 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 MAP3K14Q99558 947 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 HTATIP2Q9BUP3 242 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 SPZ1Q9BXG8 430 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 C11orf49Q9H6J7 331 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 SLC39A2Q9NP94 309 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 JADE2Q9NQC1 790 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 XPNPEP3Q9NQH7 507 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 DLL4Q9NR61 685 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 PDGFCQ9NRA1 345 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 CATSPERZQ9NTU4 200 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 PPP4R1LQ9P1A2 415 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 ZFP69BQ9UJL9 534 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 PNMA2Q9UL42 364 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 CNPY2Q9Y2B0 182 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 ABCB11O95342 1321 aa5.54□□□□□ -1.52
CSMD3-208ENST00000497026 DOCK5Q9H7D0 1870 aa5.53□□□□□ -1.52
CSMD3-208ENST00000497026 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.53□□□□□ -1.52
CSMD3-208ENST00000497026 FAM221BA6H8Z2 402 aa5.53□□□□□ -1.52
CSMD3-208ENST00000497026 C9orf118A6NHY6 69 aa5.53□□□□□ -1.52
CSMD3-208ENST00000497026 CCDC69A6NI79 296 aa5.53□□□□□ -1.52
CSMD3-208ENST00000497026 ASB14A6NK59 587 aa5.53□□□□□ -1.52
CSMD3-208ENST00000497026 H0YGN5 161 aa5.53□□□□□ -1.52
CSMD3-208ENST00000497026 EPB41L2O43491 1005 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms