RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, human

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EXOSC3-208	ENST00000496910	FASTKD5	Q7L8L6	764 aa	Known RBP	4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	RALYL	Q86SE5	291 aa	Known RBP	4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	SNX32	Q86XE0	403 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	DENND1C	Q8IV53	801 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	UNC5B	Q8IZJ1	945 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	MIER2	Q8N344	545 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	CHCHD4	Q8N4Q1	142 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	CAMKK1	Q8N5S9	505 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	SLC30A5	Q8TAD4	765 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	SPATA18	Q8TC71	538 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	NUP133	Q8WUM0	1156 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	AUTS2	Q8WXX7	1259 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	HDAC2	Q92769	488 aa	Known RBP	4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	MVB12A	Q96EY5	273 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	HIST1H2AH	Q96KK5	128 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	SLC2A13	Q96QE2	648 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	HIST1H2AJ	Q99878	128 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	TTLL2	Q9BWV7	592 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	OR10A2	Q9H208	303 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	UNC45A	Q9H3U1	944 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	GRHPR	Q9UBQ7	328 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	TTLL3	Q9Y4R7	772 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	PCDHGB2	Q9Y5G2	931 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	TUBGCP6	Q96RT7	1819 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	TMEM2	Q9UHN6	1383 aa		4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	TCF20	Q9UGU0	1960 aa	Known RBP	4.22	□□□□□ -1.73
EXOSC3-208	ENST00000496910	PNPLA7	Q6ZV29	1317 aa		4.21	□□□□□ -1.73
EXOSC3-208	ENST00000496910	SSH2	Q76I76	1423 aa		4.21	□□□□□ -1.73
EXOSC3-208	ENST00000496910	NALCN	Q8IZF0	1738 aa		4.21	□□□□□ -1.73
EXOSC3-208	ENST00000496910		A0A0G2JLL6	359 aa	Predicted RBP	4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910		B4E171	279 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	ARHGAP6	O43182	974 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	PLOD3	O60568	738 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	TBX18	O95935	607 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	CSTB	P04080	98 aa	Known RBP	4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	DHRS4L1	P0CG22	281 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	BMP7	P18075	431 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	OAS2	P29728	719 aa	Known RBP	4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	GALNS	P34059	522 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	HOXD12	P35452	270 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	KRT20	P35900	424 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	CLK1	P49759	484 aa	Known RBP	4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	ADCY7	P51828	1080 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	ICA1	Q05084	483 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	SPIDR	Q14159	915 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	SEPT2	Q15019	361 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	CNN3	Q15417	329 aa	Known RBP	4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	FAM209B	Q5JX69	171 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	KIAA1614	Q5VZ46	1190 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	MBNL2	Q5VZF2	373 aa	Known RBP	4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	TMTC1	Q8IUR5	882 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	PRR18	Q8N4B5	295 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	WDR48	Q8TAF3	677 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	SSH1	Q8WYL5	1049 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	USP13	Q92995	863 aa	Predicted RBP	4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	HVCN1	Q96D96	273 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	C1GALT1C1	Q96EU7	318 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	UHRF1	Q96T88	793 aa	Predicted RBP	4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	PTPN18	Q99952	460 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	CHCHD6	Q9BRQ6	235 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	ENKD1	Q9H0I2	346 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	PLEKHA5	Q9HAU0	1116 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	ATP6V0A4	Q9HBG4	840 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	ACAD8	Q9UKU7	415 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	ISY1	Q9ULR0	285 aa	Known RBP	4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	CORO2B	Q9UQ03	480 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	XIRP2	A4UGR9	3374 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	ASPM	Q8IZT6	3477 aa		4.21	□□□□□ -1.74
EXOSC3-208	ENST00000496910	ARHGEF5	Q12774	1597 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	C1orf167	Q5SNV9	1468 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	PMS2P1	A4D2B8	440 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	SYNDIG1L	A6NDD5	238 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	RHPN2P1	A8MT19	583 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	WNT10B	O00744	389 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	MTSS1	O43312	755 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	PRICKLE3	O43900	615 aa	Predicted RBP	4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	TIPRL	O75663	272 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	ALDH2	P05091	517 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	POLB	P06746	335 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	FAM200B	P0CF97	657 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	ATP1A3	P13637	1013 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	MTHFD2	P13995	350 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	PDC	P20941	246 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	XPA	P23025	273 aa	Predicted RBP	4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	RPS6KB1	P23443	525 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	CTSS	P25774	331 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	CNTF	P26441	200 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	PDIA3	P30101	505 aa	Known RBP	4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	HOXC13	P31276	330 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	UBA7	P41226	1012 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	MCAM	P43121	646 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	AGFG1	P52594	562 aa	Known RBP	4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	CDK17	Q00537	523 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	MGAT5	Q09328	741 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	KIAA2012	Q0VF49	1180 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	GALNT1	Q10472	559 aa	Predicted RBP	4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	POSTN	Q15063	836 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	TAF5	Q15542	800 aa		4.2	□□□□□ -1.74
EXOSC3-208	ENST00000496910	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms