RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 CNKSR3Q6P9H4 555 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 COLGALT2Q8IYK4 626 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 TMEM35BQ8NCS4 154 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 NUP85Q9BW27 656 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 ADAM22Q9P0K1 906 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 TSPAN16Q9UKR8 245 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 PACSIN2Q9UNF0 486 aaPredicted RBP17.91■□□□□ 0.46
LMNA-216ENST00000496738 CEP83Q9Y592 693 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 TBKBP1A7MCY6 615 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 RIOK3O14730 519 aaKnown RBP17.91■□□□□ 0.46
LMNA-216ENST00000496738 DSC1Q08554 894 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 UNC93AQ86WB7 457 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 TPCN2Q8NHX9 752 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 UROC1Q96N76 676 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 TJP2Q9UDY2 1190 aa17.91■□□□□ 0.46
LMNA-216ENST00000496738 A0A0A6YYK5 440 aaPredicted RBP17.9■□□□□ 0.46
LMNA-216ENST00000496738 GJB6O95452 261 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 LSM8O95777 96 aaKnown RBP17.9■□□□□ 0.46
LMNA-216ENST00000496738 WARSP23381 471 aaKnown RBP17.9■□□□□ 0.46
LMNA-216ENST00000496738 ADORA2BP29275 332 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 CYP4A22Q5TCH4 519 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 NPAS4Q8IUM7 802 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 CRIPAKQ8N1N5 446 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 BTBD6Q96KE9 485 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 PSMB7Q99436 277 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 FAM124BQ9H5Z6 455 aaPredicted RBP17.9■□□□□ 0.46
LMNA-216ENST00000496738 DDX43Q9NXZ2 648 aaKnown RBP17.9■□□□□ 0.46
LMNA-216ENST00000496738 GTF3C4Q9UKN8 822 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 HYOU1Q9Y4L1 999 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 PCDHGC5Q9Y5F6 944 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 TMEM110-MUSTN1A8MSY1 372 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 KIAA0355O15063 1070 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 PBX3P40426 434 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 BCAR1P56945 870 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 FAM117BQ6P1L5 589 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 KANSL3Q9P2N6 904 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 MICAL3Q7RTP6 2002 aa17.9■□□□□ 0.46
LMNA-216ENST00000496738 SPDYE4A6NLX3 237 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 PIK3R2O00459 728 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 CYP1A2P05177 515 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 AARSP49588 968 aaKnown RBP eCLIP17.89■□□□□ 0.45
LMNA-216ENST00000496738 PTP4A2Q12974 167 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 CNGA2Q16280 664 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 KIAA0319Q5VV43 1072 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 DCLRE1AQ6PJP8 1040 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 DAAM2Q86T65 1068 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 PHF13Q86YI8 300 aaPredicted RBP17.89■□□□□ 0.45
LMNA-216ENST00000496738 RHOT2Q8IXI1 618 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 NRDE2Q9H7Z3 1164 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.89■□□□□ 0.45
LMNA-216ENST00000496738 BUB1BO60566 1050 aaPredicted RBP17.89■□□□□ 0.45
LMNA-216ENST00000496738 SRGAP2O75044 1071 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 ODC1P11926 461 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 MMP8P22894 467 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 RFC2P35250 354 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 ZNF564Q8TBZ8 553 aaPredicted RBP17.89■□□□□ 0.45
LMNA-216ENST00000496738 RSPH1Q8WYR4 309 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 TTC3P53804 2025 aa17.89■□□□□ 0.45
LMNA-216ENST00000496738 CDH5P33151 784 aaPredicted RBP17.88■□□□□ 0.45
LMNA-216ENST00000496738 IFI16Q16666 785 aaKnown RBP17.88■□□□□ 0.45
LMNA-216ENST00000496738 PTPN20Q4JDL3 420 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 LCLAT1Q6UWP7 414 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 UBE2Q1Q7Z7E8 422 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 TTC30AQ86WT1 665 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 ERICH1Q86X53 443 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 LRRC57Q8N9N7 239 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 B3GALNT2Q8NCR0 500 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 TRIM7Q9C029 511 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 LHX5Q9H2C1 402 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 KIAA1257Q9ULG3 409 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 JRKLQ9Y4A0 524 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 MYH10P35580 1976 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 GABRDO14764 452 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 PFKMP08237 780 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 TKTP29401 623 aaKnown RBP17.88■□□□□ 0.45
LMNA-216ENST00000496738 DEFB103AP81534 67 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 LIN9Q5TKA1 542 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 MFSD5Q6N075 450 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 CRYBG2Q8N1P7 616 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 SLC2A14Q8TDB8 520 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 TRIM11Q96F44 468 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 CPXM1Q96SM3 734 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 ST7Q9NRC1 585 aa17.88■□□□□ 0.45
LMNA-216ENST00000496738 NT5C1B-RDH14C9J2C7 533 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 GPD2P43304 727 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 RGS7P49802 495 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 C1QBPQ07021 282 aaKnown RBP17.87■□□□□ 0.45
LMNA-216ENST00000496738 MESDQ14696 234 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 MDH1BQ5I0G3 518 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 TMEM199Q8N511 208 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 TNIP3Q96KP6 325 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 ZNF518BQ9C0D4 1074 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 SYNCQ9H7C4 482 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 TSC2P49815 1807 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 CLDN5O00501 218 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 HOXA2O43364 376 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 ERBB2P04626 1255 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 PTPN1P18031 435 aaKnown RBP17.87■□□□□ 0.45
LMNA-216ENST00000496738 CXCR5P32302 372 aa17.87■□□□□ 0.45
LMNA-216ENST00000496738 PDCLQ13371 301 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms