RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	GIPC2	Q8TF65	315 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	ING5	Q8WYH8	240 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	TAF4B	Q92750	862 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	SLC35C1	Q96A29	364 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	ZNF512	Q96ME7	567 aa	Predicted RBP	10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	RHOBTB2	Q9BYZ6	727 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	DPEP3	Q9H4B8	488 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	VRTN	Q9H8Y1	702 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	APOBEC3G	Q9HC16	384 aa	Known RBP	10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	CRTAC1	Q9NQ79	661 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	RAB20	Q9NX57	234 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	TMEM63C	Q9P1W3	806 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	CEP72	Q9P209	647 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	DACH1	Q9UI36	760 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	CDH9	Q9ULB4	789 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	NR2E1	Q9Y466	385 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	C19orf67	A6NJJ6	358 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	TNFRSF10A	O00220	468 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	GNA14	O95837	355 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	RHO	P08100	348 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	MYL4	P12829	197 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	PTPN1	P18031	435 aa	Known RBP	10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	CD58	P19256	250 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	MTIF2	P46199	727 aa	Known RBP	10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	FMO5	P49326	533 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	TUFM	P49411	452 aa	Known RBP	10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	GPR15	P49685	360 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	KCNH2	Q12809	1159 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	NFE2	Q16621	373 aa	Predicted RBP	10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	DDR2	Q16832	855 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	WDR44	Q5JSH3	913 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	SDHAF4	Q5VUM1	108 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	FOXR2	Q6PJQ5	311 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	RTL10	Q7L3V2	364 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	OTOP3	Q7RTS5	596 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	ACOT1	Q86TX2	421 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	TRIM59	Q8IWR1	403 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	SCN4B	Q8IWT1	228 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	STKLD1	Q8NE28	680 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	SPPL2B	Q8TCT7	592 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	TATDN2	Q93075	761 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	MYLPF	Q96A32	169 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	ACSF2	Q96CM8	615 aa	Predicted RBP	10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	TCEAL4	Q96EI5	215 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	CNOT6L	Q96LI5	555 aa	Known RBP	10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	MYADM	Q96S97	322 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	PKMYT1	Q99640	499 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	NIF3L1	Q9GZT8	377 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	LIMD1	Q9UGP4	676 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	MAFF	Q9ULX9	164 aa		10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	MRPS23	Q9Y3D9	190 aa	Known RBP	10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
CALD1-223	ENST00000496024	CLDN5	O00501	218 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	N4BP1	O75113	896 aa	Known RBP	10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	ASGR2	P07307	311 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	HAPLN1	P10915	354 aa	Predicted RBP	10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	GJA1	P17302	382 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	KCNA4	P22459	653 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	BDNF	P23560	247 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	ERCC5	P28715	1186 aa	Predicted RBP	10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	ASPA	P45381	313 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	NDST1	P52848	882 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	MCCD1	P59942	119 aa	Predicted RBP	10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	SMARCB1	Q12824	385 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	PLD1	Q13393	1074 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	TAF12	Q16514	161 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	SLC5A9	Q2M3M2	681 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	CYP4A22	Q5TCH4	519 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	FAM171B	Q6P995	826 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	C4orf50	Q6ZRC1	276 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	RBM43	Q6ZSC3	357 aa	Known RBP	10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	PDZD4	Q76G19	769 aa	Predicted RBP	10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	IRF2BP1	Q8IU81	584 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	RNF135	Q8IUD6	432 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	B3GALNT2	Q8NCR0	500 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	C2orf15	Q8WU43	125 aa	Known RBP	10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	MED10	Q9BTT4	135 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	DNAJC25	Q9H1X3	360 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	ASAH2	Q9NR71	780 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	ANO10	Q9NW15	660 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	HMGXB4	Q9UGU5	601 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	MUTYH	Q9UIF7	546 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	UST	Q9Y2C2	406 aa		10.48	□□□□□ -0.73
CALD1-223	ENST00000496024	TRIO	O75962	3097 aa		10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	NRG2	O14511	850 aa	Predicted RBP	10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	PAPLN	O95428	1278 aa		10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	AFP	P02771	609 aa	Known RBP	10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	POU2F2	P09086	479 aa		10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	FAM163B	P0C2L3	166 aa		10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	CEBPB	P17676	345 aa		10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	ATF6	P18850	670 aa		10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	CCR2	P41597	374 aa		10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	VEPH1	Q14D04	833 aa		10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	MAPRE1	Q15691	268 aa	Known RBP	10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	STX1A	Q16623	288 aa		10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	ZNF394	Q53GI3	561 aa		10.47	□□□□□ -0.73
CALD1-223	ENST00000496024	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms