RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TNNI1P19237 187 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 CYP2F1P24903 491 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 MYL7Q01449 175 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 CSTF1Q05048 431 aaKnown RBP10.31□□□□□ -0.76
MSH5-218ENST00000494646 FZD5Q13467 585 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 VEPH1Q14D04 833 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 SURF1Q15526 300 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 CCDC142Q17RM4 750 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 SOWAHAQ2M3V2 549 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 ATL3Q6DD88 541 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 CEP57L1Q8IYX8 460 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 MAML2Q8IZL2 1156 aaPredicted RBP10.31□□□□□ -0.76
MSH5-218ENST00000494646 CSGALNACT1Q8TDX6 532 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 CCDC127Q96BQ5 260 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 HPDLQ96IR7 371 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 ZFYVE19Q96K21 471 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 NELL2Q99435 816 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 ACBD6Q9BR61 282 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 MKNK1Q9BUB5 465 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 SLC46A2Q9BY10 475 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 SMG9Q9H0W8 520 aaKnown RBP10.31□□□□□ -0.76
MSH5-218ENST00000494646 LMAN1LQ9HAT1 526 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 TRPV4Q9HBA0 871 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 IL21Q9HBE4 155 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 AGPAT3Q9NRZ7 376 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 WDR70Q9NW82 654 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 HSFX1Q9UBD0 423 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 ITGA11Q9UKX5 1188 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 ZDHHC9Q9Y397 364 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 FAM186AA6NE01 2351 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 GREB1Q4ZG55 1949 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 ANAPC1Q9H1A4 1944 aa10.31□□□□□ -0.76
MSH5-218ENST00000494646 PATJQ8NI35 1801 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 SPTBN4Q9H254 2564 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 MYH10P35580 1976 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 MAN2B1O00754 1011 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 KIAA0391O15091 583 aaKnown RBP10.3□□□□□ -0.76
MSH5-218ENST00000494646 EIF3DO15371 548 aaKnown RBP eCLIP10.3□□□□□ -0.76
MSH5-218ENST00000494646 NCAM2O15394 837 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 LAMTOR5O43504 91 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 CCNE1P24864 410 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 LMO2P25791 158 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 SOX9P48436 509 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 EHHADHQ08426 723 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 SMARCB1Q12824 385 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 MYO1EQ12965 1108 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 SNRNP35Q16560 246 aaKnown RBP10.3□□□□□ -0.76
MSH5-218ENST00000494646 ARHGAP15Q53QZ3 475 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 CNNM4Q6P4Q7 775 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 TSSK4Q6SA08 328 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 TRAPPC11Q7Z392 1133 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 SCN4BQ8IWT1 228 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 ADGRF2Q8IZF7 708 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 ADSSL1Q8N142 457 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 TMEM86AQ8N2M4 240 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 LRRC52Q8N7C0 313 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 XXYLT1Q8NBI6 393 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 C2orf15Q8WU43 125 aaKnown RBP10.3□□□□□ -0.76
MSH5-218ENST00000494646 DEPDC1BQ8WUY9 529 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 FAM3CQ92520 227 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 ZNF516Q92618 1163 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 DNASE1L2Q92874 299 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 E2F7Q96AV8 911 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 PAGE5Q96GU1 130 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 FNBP1Q96RU3 617 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 MMS19Q96T76 1030 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 OSBPL6Q9BZF3 934 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 TASP1Q9H6P5 420 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 MAGEF1Q9HAY2 307 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 KIAA1586Q9HCI6 787 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 GDAP2Q9NXN4 497 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 MRPS17Q9Y2R5 130 aaKnown RBP10.3□□□□□ -0.76
MSH5-218ENST00000494646 PIAS3Q9Y6X2 628 aa10.3□□□□□ -0.76
MSH5-218ENST00000494646 ZNF292O60281 2723 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 PVALEFA0A1B0GWK0 134 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 SLC38A8A6NNN8 435 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 CHADO15335 359 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 KLRC4O43908 158 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 PRAMEF12O95522 483 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 FGF19O95750 216 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 F11P03951 625 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 SLFN14P0C7P3 912 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 HMGA1P17096 107 aaKnown RBP10.29□□□□□ -0.76
MSH5-218ENST00000494646 CDC25CP30307 473 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 LHX1P48742 406 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 CASP4P49662 377 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 KPNA1P52294 538 aaPredicted RBP10.29□□□□□ -0.76
MSH5-218ENST00000494646 PSMC1P62191 440 aaKnown RBP10.29□□□□□ -0.76
MSH5-218ENST00000494646 STK4Q13043 487 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 NFE2Q16621 373 aaPredicted RBP10.29□□□□□ -0.76
MSH5-218ENST00000494646 INTS6LQ5JSJ4 861 aaKnown RBP10.29□□□□□ -0.76
MSH5-218ENST00000494646 TXNDC8Q6A555 127 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 HS2ST1Q7LGA3 356 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 SPATA2LQ8IUW3 424 aaPredicted RBP10.29□□□□□ -0.76
MSH5-218ENST00000494646 WDR49Q8IV35 697 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 TOP6BLQ8N6T0 577 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 MAB21L3Q8N8X9 362 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 TTC16Q8NEE8 873 aa10.29□□□□□ -0.76
MSH5-218ENST00000494646 LEO1Q8WVC0 666 aaPredicted RBP10.29□□□□□ -0.76
MSH5-218ENST00000494646 CLDN23Q96B33 292 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms