RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 AOPEPQ8N6M6 819 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 AGBL5Q8NDL9 886 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 Q8NFD4 153 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 NLGN2Q8NFZ4 835 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.36□□□□□ -1.23
SNX13-210ENST00000494402 GRK7Q8WTQ7 553 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 KRT35Q92764 455 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 FOXRED1Q96CU9 486 aaPredicted RBP7.36□□□□□ -1.23
SNX13-210ENST00000494402 TCTN2Q96GX1 697 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 GBP4Q96PP9 640 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 MAK16Q9BXY0 300 aaKnown RBP7.36□□□□□ -1.23
SNX13-210ENST00000494402 TNMDQ9H2S6 317 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 NDST4Q9H3R1 872 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 MANSC1Q9H8J5 431 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 PDE7BQ9NP56 450 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 DECR2Q9NUI1 292 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 KCTD5Q9NXV2 234 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 FBXL5Q9UKA1 691 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 HSF4Q9ULV5 492 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 MED16Q9Y2X0 877 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 CCL27Q9Y4X3 112 aa7.36□□□□□ -1.23
SNX13-210ENST00000494402 SHISA3A0PJX4 238 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 MBD3L4A6NDZ8 208 aaPredicted RBP7.35□□□□□ -1.23
SNX13-210ENST00000494402 MBD3L3A6NE82 208 aaPredicted RBP7.35□□□□□ -1.23
SNX13-210ENST00000494402 E7EVH7 732 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 PYCARD-AS1I3L0S3 204 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 KCNQ3O43525 872 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 KERAO60938 352 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 PPFIA2O75334 1257 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 PRLP01236 227 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 FPR2P25090 351 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 KLRC1P26715 233 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 ADH6P28332 368 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 HSPA4P34932 840 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 DEKP35659 375 aaKnown RBP7.35□□□□□ -1.23
SNX13-210ENST00000494402 ALDH18A1P54886 795 aaKnown RBP7.35□□□□□ -1.23
SNX13-210ENST00000494402 SOX8P57073 446 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 SLC6A3Q01959 620 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 ROM1Q03395 351 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 SOX4Q06945 474 aaPredicted RBP7.35□□□□□ -1.23
SNX13-210ENST00000494402 COASYQ13057 564 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 MRPL28Q13084 256 aaKnown RBP7.35□□□□□ -1.23
SNX13-210ENST00000494402 MAN2A1Q16706 1144 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 CCDC178Q5BJE1 867 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 PLEKHS1Q5SXH7 462 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 MEX3CQ5U5Q3 659 aaKnown RBP7.35□□□□□ -1.23
SNX13-210ENST00000494402 EMC10Q5UCC4 262 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 SLFN12LQ6IEE8 588 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 IRGCQ6NXR0 463 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 WDR73Q6P4I2 378 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 INO80CQ6PI98 192 aaPredicted RBP7.35□□□□□ -1.23
SNX13-210ENST00000494402 PET117Q6UWS5 81 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 CYP2R1Q6VVX0 501 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 METTL23Q86XA0 190 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 CDYL2Q8N8U2 506 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 HIPK4Q8NE63 616 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 NFKBIDQ8NI38 313 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 FBXO30Q8TB52 745 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 METTL6Q8TCB7 284 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 SLC22A17Q8WUG5 538 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 GAB3Q8WWW8 586 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 ASB15Q8WXK1 588 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 VPS33AQ96AX1 596 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 C3orf49Q96BT1 292 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 KTI12Q96EK9 354 aaPredicted RBP7.35□□□□□ -1.23
SNX13-210ENST00000494402 RUNDC3BQ96NL0 473 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 TMEM237Q96Q45 408 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 MDFIQ99750 246 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 FTOQ9C0B1 505 aaKnown RBP eCLIP7.35□□□□□ -1.23
SNX13-210ENST00000494402 ZCWPW1Q9H0M4 648 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 SUGCTQ9HAC7 445 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 HEYLQ9NQ87 328 aaPredicted RBP7.35□□□□□ -1.23
SNX13-210ENST00000494402 USP40Q9NVE5 1235 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 RGS17Q9UGC6 210 aaPredicted RBP7.35□□□□□ -1.23
SNX13-210ENST00000494402 CA14Q9ULX7 337 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 NAALADL1Q9UQQ1 740 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 DNAJC16Q9Y2G8 782 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 ASB1Q9Y576 335 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 X6R8D5 127 aa7.35□□□□□ -1.23
SNX13-210ENST00000494402 A0A0U1RQK1 487 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 ZNF320A2RRD8 509 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 CDC14CA4D256 554 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 MEGF11A6BM72 1044 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 VWA3AA6NCI4 1184 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 FAM90A27PA6NNH2 459 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 H3BM21 787 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 PES1O00541 588 aaKnown RBP7.34□□□□□ -1.23
SNX13-210ENST00000494402 ADAM20O43506 726 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 DNPH1O43598 174 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 SEC22BO75396 215 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 MMEP08473 750 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 TXNP10599 105 aaKnown RBP7.34□□□□□ -1.23
SNX13-210ENST00000494402 UBL4AP11441 157 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 TNNT1P13805 278 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 SYN1P17600 705 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 ENDOUP21128 410 aaKnown RBP7.34□□□□□ -1.23
SNX13-210ENST00000494402 FGFR4P22455 802 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 IL1R2P27930 398 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 GCH1P30793 250 aa7.34□□□□□ -1.23
SNX13-210ENST00000494402 TLX1P31314 330 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms