RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PTPN1P18031 435 aaKnown RBP13.31□□□□□ -0.28
TRA2A-209ENST00000494255 CD58P19256 250 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 CDK11BP21127 795 aaKnown RBP13.31□□□□□ -0.28
TRA2A-209ENST00000494255 ALDH1A3P47895 512 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 TUFMP49411 452 aaKnown RBP13.31□□□□□ -0.28
TRA2A-209ENST00000494255 LRMPQ12912 555 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 CBX2Q14781 532 aaPredicted RBP13.31□□□□□ -0.28
TRA2A-209ENST00000494255 MGAT5BQ3V5L5 792 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 VWA3BQ502W6 1294 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 GBP6Q6ZN66 633 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 UNC93AQ86WB7 457 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 EHBP1Q8NDI1 1231 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 SUSD6Q92537 303 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 TATDN2Q93075 761 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 SEPT5Q99719 369 aaPredicted RBP13.31□□□□□ -0.28
TRA2A-209ENST00000494255 RHOBTB2Q9BYZ6 727 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 INTS2Q9H0H0 1204 aaKnown RBP13.31□□□□□ -0.28
TRA2A-209ENST00000494255 NDST4Q9H3R1 872 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 FAM124BQ9H5Z6 455 aaPredicted RBP13.31□□□□□ -0.28
TRA2A-209ENST00000494255 TMLHEQ9NVH6 421 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 GCNT4Q9P109 453 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 SLC27A5Q9Y2P5 690 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 YIPF1Q9Y548 306 aa13.31□□□□□ -0.28
TRA2A-209ENST00000494255 MYBPHLA2RUH7 354 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 VNN2O95498 520 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 CAVIN2O95810 425 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 POU2F2P09086 479 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 CDR1P51861 262 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 NDST1P52848 882 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 EPHB3P54753 998 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 INCA1Q0VD86 236 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 TWF1Q12792 350 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 CUL2Q13617 745 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 SMAD2Q15796 467 aaKnown RBP13.3□□□□□ -0.28
TRA2A-209ENST00000494255 MDH1BQ5I0G3 518 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 TJAP1Q5JTD0 557 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 FAM171BQ6P995 826 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 PPM1KQ8N3J5 372 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 B3GALNT2Q8NCR0 500 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 MYCBPAPQ8TBZ2 947 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 ZNF707Q96C28 371 aaPredicted RBP13.3□□□□□ -0.28
TRA2A-209ENST00000494255 PKMYT1Q99640 499 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 DPEP3Q9H4B8 488 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 ABCB6Q9NP58 842 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 CRTAC1Q9NQ79 661 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 TAB2Q9NYJ8 693 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 REV3LO60673 3130 aa13.3□□□□□ -0.28
TRA2A-209ENST00000494255 ATP8B3O60423 1300 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 GTPBP10A4D1E9 387 aaKnown RBP13.29□□□□□ -0.28
TRA2A-209ENST00000494255 PAPLNO95428 1278 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 HAPLN1P10915 354 aaPredicted RBP13.29□□□□□ -0.28
TRA2A-209ENST00000494255 IL9P15248 144 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 CYP27A1Q02318 531 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 VEPH1Q14D04 833 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 EXOC3L4Q17RC7 722 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 IQCEQ6IPM2 695 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 ACOT1Q86TX2 421 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 TTC9BQ8N6N2 239 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 LMO3Q8TAP4 145 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 MYLPFQ96A32 169 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 FUBP3Q96I24 572 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRA2A-209ENST00000494255 ZNF512Q96ME7 567 aaPredicted RBP13.29□□□□□ -0.28
TRA2A-209ENST00000494255 ARID3AQ99856 593 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 CRACR2AQ9BSW2 395 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 NT5C1AQ9BXI3 368 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 CDH22Q9UJ99 828 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 NME7Q9Y5B8 376 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 C2orf16Q68DN1 1984 aa13.29□□□□□ -0.28
TRA2A-209ENST00000494255 CILPO75339 1184 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 BMP1P13497 986 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 RPL10AP62906 217 aaKnown RBP13.28□□□□□ -0.28
TRA2A-209ENST00000494255 TPM4P67936 248 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 NCAPHQ15003 741 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 KRT31Q15323 416 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 CFAP221Q4G0U5 840 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 MIIPQ5JXC2 388 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 DHX40Q8IX18 779 aaKnown RBP13.28□□□□□ -0.28
TRA2A-209ENST00000494255 FAM200AQ8TCP9 573 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 PHF7Q9BWX1 381 aaPredicted RBP13.28□□□□□ -0.28
TRA2A-209ENST00000494255 CRISPLD1Q9H336 500 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 CISHQ9NSE2 258 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 SOAT2O75908 522 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 PTPN2P17706 415 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 CYP2F1P24903 491 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 MAGEA11P43364 429 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 GCNT1Q02742 428 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 ORC1Q13415 861 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 CCDC142Q17RM4 750 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 FKBP15Q5T1M5 1219 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 TRIM65Q6PJ69 517 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 GRASPQ7Z6J2 395 aaPredicted RBP13.28□□□□□ -0.28
TRA2A-209ENST00000494255 ITIH5Q86UX2 942 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 CRYBG2Q8N1P7 616 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 PCED1BQ96HM7 432 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 FAM81BQ96LP2 452 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 CORO1BQ9BR76 489 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 MED10Q9BTT4 135 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 ELOVL4Q9GZR5 314 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 VPS16Q9H269 839 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 POMKQ9H5K3 350 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms