RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 KPNA6O60684 536 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 HSF2BPO75031 334 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 HMGCRP04035 888 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 RALAP11233 206 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 GNAT1P11488 350 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 KCNE1P15382 129 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 AKAP5P24588 427 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 PTPN7P35236 360 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 PSMC4P43686 418 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 SLC25A11Q02978 314 aaKnown RBP11.26□□□□□ -0.61
CLCN6-208ENST00000494028 MGAT3Q09327 533 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 MYO1EQ12965 1108 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 CNGA2Q16280 664 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 HSP90B2PQ58FF3 399 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 LRRC38Q5VT99 294 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 GDF6Q6KF10 455 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-208ENST00000494028 CCDC137Q6PK04 289 aaKnown RBP11.26□□□□□ -0.61
CLCN6-208ENST00000494028 TMC3Q7Z5M5 1100 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 SMG8Q8ND04 991 aaKnown RBP11.26□□□□□ -0.61
CLCN6-208ENST00000494028 FNIP1Q8TF40 1166 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 MAIP1Q8WWC4 291 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 ATG4AQ8WYN0 398 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 MCRS1Q96EZ8 462 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 RBM41Q96IZ5 413 aaKnown RBP11.26□□□□□ -0.61
CLCN6-208ENST00000494028 ZNF560Q96MR9 790 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 SLITRK1Q96PX8 696 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 ERP44Q9BS26 406 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 TXLNGYQ9BZA5 131 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 TRIM31Q9BZY9 425 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 TRIM6Q9C030 488 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-208ENST00000494028 DCLK3Q9C098 648 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 CHST7Q9NS84 486 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 WDR35Q9P2L0 1181 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 TSPAN16Q9UKR8 245 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 R3HDM2Q9Y2K5 976 aaKnown RBP11.26□□□□□ -0.61
CLCN6-208ENST00000494028 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLCN6-208ENST00000494028 IPPQ9Y573 584 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 CDY2AQ9Y6F7 541 aa11.26□□□□□ -0.61
CLCN6-208ENST00000494028 COL4A4P53420 1690 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-208ENST00000494028 SEPT4O43236 478 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 AOC2O75106 756 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 ECEL1O95672 775 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 PGK1P00558 417 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 PFKMP08237 780 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 PSMA2P25787 234 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 FLT3P36888 993 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 GPD2P43304 727 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 RPL21P46778 160 aaKnown RBP11.25□□□□□ -0.61
CLCN6-208ENST00000494028 GABRB2P47870 512 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 FLT3LGP49771 235 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 GYS2P54840 703 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 PSMC1P62191 440 aaKnown RBP11.25□□□□□ -0.61
CLCN6-208ENST00000494028 SOX4Q06945 474 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-208ENST00000494028 PIGHQ14442 188 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-208ENST00000494028 PKDCCQ504Y2 493 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 TTMPQ5BVD1 217 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 CFAP58Q5T655 872 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 ALS2CLQ60I27 953 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 TXNRD3NBQ6F5E7 133 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 DCUN1D2Q6PH85 259 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 LCLAT1Q6UWP7 414 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 CXCL17Q6UXB2 119 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 CCDC50Q8IVM0 306 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 NME8Q8N427 588 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 ARRDC4Q8NCT1 418 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 IPO4Q8TEX9 1081 aaKnown RBP11.25□□□□□ -0.61
CLCN6-208ENST00000494028 KBTBD7Q8WVZ9 684 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 C1orf54Q8WWF1 131 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 FMO2Q99518 471 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 NT5C1AQ9BXI3 368 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 OSBPL8Q9BZF1 889 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 SENP6Q9GZR1 1112 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-208ENST00000494028 RNF19AQ9NV58 838 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 KLK14Q9P0G3 267 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 SNX9Q9Y5X1 595 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 TANC1Q9C0D5 1861 aa11.25□□□□□ -0.61
CLCN6-208ENST00000494028 hCG_1818297A0A087WSY0 165 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 SMIM28A0A1B0GU29 152 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 SIGLEC16A6NMB1 481 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 F8VP50 259 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 PI4K2BG5E9Z4 385 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 PIRO00625 290 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 PTGESO14684 152 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 SPTLC1O15269 473 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 XPOTO43592 962 aaKnown RBP11.24□□□□□ -0.61
CLCN6-208ENST00000494028 PPFIA2O75334 1257 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 LRCH4O75427 683 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 ALDH1A1P00352 501 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 SETSIPP0DME0 302 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 CST5P28325 142 aaPredicted RBP11.24□□□□□ -0.61
CLCN6-208ENST00000494028 GBP1P32455 592 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 HSD17B3P37058 310 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 SSR1P43307 286 aaKnown RBP11.24□□□□□ -0.61
CLCN6-208ENST00000494028 KCNJ1P48048 391 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 VEGFBP49765 207 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 DRG2P55039 364 aaKnown RBP11.24□□□□□ -0.61
CLCN6-208ENST00000494028 KRT17Q04695 432 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 PTK6Q13882 451 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 LLGL1Q15334 1064 aa11.24□□□□□ -0.61
CLCN6-208ENST00000494028 STILQ15468 1287 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms