RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 MDGA1Q8NFP4 955 aa7.22□□□□□ -1.25
SMC2-205ENST00000493955 PHACTR3Q96KR7 559 aa7.22□□□□□ -1.25
SMC2-205ENST00000493955 SLC46A1Q96NT5 459 aa7.22□□□□□ -1.25
SMC2-205ENST00000493955 SMOQ99835 787 aa7.22□□□□□ -1.25
SMC2-205ENST00000493955 ETAA1Q9NY74 926 aa7.22□□□□□ -1.25
SMC2-205ENST00000493955 HECAQ9UBI9 543 aaPredicted RBP7.22□□□□□ -1.25
SMC2-205ENST00000493955 CAPN11Q9UMQ6 739 aa7.22□□□□□ -1.25
SMC2-205ENST00000493955 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 H7C4K7 107 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 NCAM2O15394 837 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 VPS4BO75351 444 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 TNFRSF6BO95407 300 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 AGR2O95994 175 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 SRGNP10124 158 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 TPH1P17752 444 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 GCSHP23434 173 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 EPHB4P54760 987 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 SURF1Q15526 300 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 MAPKAPK3Q16644 382 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 JAKMIP3Q5VZ66 844 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 PLAG1Q6DJT9 500 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 FCRL6Q6DN72 434 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 TANGO2Q6ICL3 276 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 LIN54Q6MZP7 749 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 KIAA0408Q6ZU52 694 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 USP49Q70CQ1 688 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 TAX1BP1Q86VP1 789 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 GATAD2AQ86YP4 633 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 UBXN10Q96LJ8 280 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 ZSCAN31Q96LW9 406 aaPredicted RBP7.21□□□□□ -1.25
SMC2-205ENST00000493955 OR14A2Q96R54 314 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 MPHOSPH9Q99550 1183 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 KATNAL1Q9BW62 490 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 TTYH3Q9C0H2 523 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 MEGF9Q9H1U4 602 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 AS3MTQ9HBK9 375 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 PLA2G3Q9NZ20 509 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 SH3BP1Q9Y3L3 701 aa7.21□□□□□ -1.25
SMC2-205ENST00000493955 IPO5O00410 1097 aaKnown RBP7.2□□□□□ -1.26
SMC2-205ENST00000493955 ASNA1O43681 348 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 NUAK1O60285 661 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 TRIM13O60858 407 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 C8AP07357 584 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 ATXN1LP0C7T5 689 aaKnown RBP7.2□□□□□ -1.26
SMC2-205ENST00000493955 PTDSS1P48651 473 aaKnown RBP7.2□□□□□ -1.26
SMC2-205ENST00000493955 SATB1Q01826 763 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 ZNF844Q08AG5 666 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 TAF5Q15542 800 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 NPY5RQ15761 445 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 MGAT5BQ3V5L5 792 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 NT5DC1Q5TFE4 455 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 MB21D1Q8N884 522 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 IL17REQ8NFR9 667 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 STT3BQ8TCJ2 826 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 EID2BQ96D98 161 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 TRIB1Q96RU8 372 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 NELL2Q99435 816 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 PRPF18Q99633 342 aaKnown RBP7.2□□□□□ -1.26
SMC2-205ENST00000493955 REXO4Q9GZR2 422 aaKnown RBP7.2□□□□□ -1.26
SMC2-205ENST00000493955 PCDHAC1Q9H158 963 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 FAM83DQ9H4H8 585 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 SHOC2Q9UQ13 582 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 ATP11BQ9Y2G3 1177 aa7.2□□□□□ -1.26
SMC2-205ENST00000493955 AQP7P3A6NL99 342 aa7.19□□□□□ -1.26
SMC2-205ENST00000493955 DCLK1O15075 740 aa7.19□□□□□ -1.26
SMC2-205ENST00000493955 TOB1P50616 345 aaPredicted RBP7.19□□□□□ -1.26
SMC2-205ENST00000493955 KRT17Q04695 432 aa7.19□□□□□ -1.26
SMC2-205ENST00000493955 BOP1Q14137 746 aaKnown RBP7.19□□□□□ -1.26
SMC2-205ENST00000493955 TIGD6Q17RP2 521 aa7.19□□□□□ -1.26
SMC2-205ENST00000493955 DCAF17Q5H9S7 520 aaPredicted RBP7.19□□□□□ -1.26
SMC2-205ENST00000493955 SLFN13Q68D06 897 aa7.19□□□□□ -1.26
SMC2-205ENST00000493955 TAPT1Q6NXT6 567 aa7.19□□□□□ -1.26
SMC2-205ENST00000493955 CCDC28AQ8IWP9 274 aa7.19□□□□□ -1.26
SMC2-205ENST00000493955 SUGP1Q8IWZ8 645 aaKnown RBP7.19□□□□□ -1.26
SMC2-205ENST00000493955 CLASRPQ8N2M8 674 aaKnown RBP7.19□□□□□ -1.26
SMC2-205ENST00000493955 PSD4Q8NDX1 1056 aa7.19□□□□□ -1.26
SMC2-205ENST00000493955 FAM167BQ9BTA0 163 aa7.19□□□□□ -1.26
SMC2-205ENST00000493955 DKK4Q9UBT3 224 aa7.19□□□□□ -1.26
SMC2-205ENST00000493955 GJD2Q9UKL4 321 aa7.19□□□□□ -1.26
SMC2-205ENST00000493955 ZMYND8Q9ULU4 1186 aaPredicted RBP7.19□□□□□ -1.26
SMC2-205ENST00000493955 EIF3FO00303 357 aaPredicted RBP7.18□□□□□ -1.26
SMC2-205ENST00000493955 LAMTOR5O43504 91 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 RRP9O43818 475 aaKnown RBP7.18□□□□□ -1.26
SMC2-205ENST00000493955 ITGA2BP08514 1039 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 HK1P19367 917 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 RAP1GAPP47736 663 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 LOXL3P58215 753 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 LMOD3Q0VAK6 560 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 MAPRE1Q15691 268 aaKnown RBP7.18□□□□□ -1.26
SMC2-205ENST00000493955 TAF12Q16514 161 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 SLC5A9Q2M3M2 681 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 SLC4A8Q2Y0W8 1093 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.18□□□□□ -1.26
SMC2-205ENST00000493955 FAXCQ5TGI0 409 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 RAP1GAP2Q684P5 730 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 MRNIPQ6NTE8 343 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 SYT12Q8IV01 421 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 MARS2Q96GW9 593 aaKnown RBP7.18□□□□□ -1.26
SMC2-205ENST00000493955 PNKPQ96T60 521 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 EIF2AK1Q9BQI3 630 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms