RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 DYNLL2Q96FJ2 89 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 ZNF333Q96JL9 665 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 KLHL4Q9C0H6 718 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 ROGDIQ9GZN7 287 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 DBNDD1Q9H9R9 158 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 POLG2Q9UHN1 485 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 ZBTB1Q9Y2K1 713 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 SNX13Q9Y5W8 968 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 ADGRG1Q9Y653 693 aa8.17□□□□□ -1.1
BRCA1-221ENST00000493795 RPAP1Q9BWH6 1393 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-221ENST00000493795 EMSYQ7Z589 1322 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 POTEMA6NI47 508 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 PSMD14O00487 310 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 HOXD10P28358 340 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 LIFRP42702 1097 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 PEX5P50542 639 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 PSMC5P62195 406 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 LGALS3BPQ08380 585 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 CBFBQ13951 182 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 AGAP9Q5VTM2 703 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 NAPEPLDQ6IQ20 393 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 BNC2Q6ZN30 1099 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 FRMD5Q7Z6J6 570 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 SLC44A2Q8IWA5 706 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 MIER2Q8N344 545 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ZCCHC7Q8N3Z6 543 aaKnown RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ATP8B4Q8TF62 1192 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ILKAPQ9H0C8 392 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 POLR1BQ9H9Y6 1135 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 NOD2Q9HC29 1040 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 RNF112Q9ULX5 631 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 GMEB1Q9Y692 573 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 USP17L3A6NCW0 530 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 USP17L4A6NCW7 530 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 PIK3CDO00329 1044 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ZNF682O95780 498 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 USP17L8P0C7I0 530 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 IRF1P10914 325 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 SSTR3P32745 418 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 CPA2P48052 419 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 RAD23AP54725 363 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 TGM3Q08188 693 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 CAMK2GQ13555 558 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 MFSD14CQ5VZR4 134 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 USPL1Q5W0Q7 1092 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 USP17L1Q7RTZ2 530 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 LINC00523Q86TU6 105 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 NT5DC4Q86YG4 428 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 IPMKQ8NFU5 416 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 CCDC126Q96EE4 140 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 MAGED4Q96JG8 741 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 SLC9A7Q96T83 725 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 MOV10L1Q9BXT6 1211 aaKnown RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 EFCAB1Q9HAE3 211 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 KLHL28Q9NXS3 571 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 COMMD9Q9P000 198 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 STAP2Q9UGK3 403 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 COQ6Q9Y2Z9 468 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 TMEM120BA0PK00 339 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 WWP2O00308 870 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 SLC16A3O15427 465 aaKnown RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 MTSS1O43312 755 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 SMNDC1O75940 238 aaKnown RBP eCLIP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 HMBSP08397 361 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 EFNA5P52803 228 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 NFYCQ13952 458 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 CCNIQ14094 377 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 CRYMQ14894 314 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 SWSAP1Q6NVH7 229 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 CASP12Q6UXS9 341 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ATG16L2Q8NAA4 619 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ZBTB10Q96DT7 871 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 SERPINB12Q96P63 405 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 TRIM51Q9BSJ1 452 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 LRRC1Q9BTT6 524 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ADAM33Q9BZ11 813 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ZNF304Q9HCX3 659 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 TRPM5Q9NZQ8 1165 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 GABBR1Q9UBS5 961 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 DYRK1BQ9Y463 629 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 PCDHGA4Q9Y5G9 962 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 NCKAP5LQ9HCH0 1330 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 A0A1W2PQC6 194 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 PSMD12O00232 456 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 PRKAB2O43741 272 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 BBOX1O75936 387 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 CLPTM1O96005 669 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 RPN2P04844 631 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ABCB1P08183 1280 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 PDGFRAP16234 1089 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 TFE3P19532 575 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 EIF2S3P41091 472 aaKnown RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 IL5RAQ01344 420 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 SFSWAPQ12872 951 aaKnown RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 SEMA3FQ13275 785 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ARID5BQ14865 1188 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 DGUOKQ16854 277 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 TMEM26Q6ZUK4 368 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 C3orf20Q8ND61 904 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms