RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 CD300LGQ6UXG3 332 aa14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 CRYBG2Q8N1P7 616 aa14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 LRRC43Q8N309 656 aa14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 RNF10Q8N5U6 811 aaKnown RBP14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 TMEM35BQ8NCS4 154 aa14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 CPA5Q8WXQ8 436 aa14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 TNIP3Q96KP6 325 aa14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 ZNF518BQ9C0D4 1074 aa14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 NRDE2Q9H7Z3 1164 aa14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 ZNF446Q9NWS9 450 aa14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 PRDM4Q9UKN5 801 aa14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 DSEQ9UL01 958 aa14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 MRFAP1Q9Y605 127 aa14.95□□□□□ -0.02
PDZRN3-210ENST00000492909 M0QZQ0 153 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 O00370 1275 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 ITGB1P05556 798 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 LMO2P25791 158 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 CLCN6P51797 869 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 GABPB1Q06547 395 aaPredicted RBP14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 PPIGQ13427 754 aaKnown RBP eCLIP14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 ZNF569Q5MCW4 686 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 CHRDL2Q6WN34 429 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 OSTM1Q86WC4 334 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 SPATA18Q8TC71 538 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 TOP1MTQ969P6 601 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 SUSD3Q96L08 255 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 GDF15Q99988 308 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 THAP2Q9H0W7 228 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 LHX5Q9H2C1 402 aa14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 PRG3Q9Y2Y8 225 aaPredicted RBP14.94□□□□□ -0.02
PDZRN3-210ENST00000492909 RANBP2P49792 3224 aaKnown RBP14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 A0A0A6YYK5 440 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 F8W810 466 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 I3L4J1 428 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 DGKIO75912 1065 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 CYP11A1P05108 521 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 CDH5P33151 784 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 NAP1L1P55209 391 aaKnown RBP14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 WDR5P61964 334 aaKnown RBP14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 GPC5P78333 572 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 METTL23Q86XA0 190 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 C12orf29Q8N999 325 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 TRIM11Q96F44 468 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 NOX5Q96PH1 765 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 UBE2OQ9C0C9 1292 aaKnown RBP14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 DPEP3Q9H4B8 488 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 ARGLU1Q9NWB6 273 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 SALL4Q9UJQ4 1053 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 TIMM13Q9Y5L4 95 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 NCANO14594 1321 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 HCRTO43612 131 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 TRAPPC3O43617 180 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 BUB1O43683 1085 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 MICAL2O94851 1124 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 MOCS3O95396 460 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 ALDH2P05091 517 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 IFI16Q16666 785 aaKnown RBP14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 C9orf50Q5SZB4 431 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 DENND1BQ6P3S1 775 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 LCLAT1Q6UWP7 414 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 ZNF365Q70YC5 407 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 PHF13Q86YI8 300 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 MCOLN2Q8IZK6 566 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 C1orf131Q8NDD1 294 aaKnown RBP14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 TRIM58Q8NG06 486 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 RFFLQ8WZ73 363 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 ZNF653Q96CK0 615 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 VCPIP1Q96JH7 1222 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 TMEM175Q9BSA9 504 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 FAM49BQ9NUQ9 324 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 DDX43Q9NXZ2 648 aaKnown RBP14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 GTF3C4Q9UKN8 822 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 TSPAN16Q9UKR8 245 aa14.93□□□□□ -0.02
PDZRN3-210ENST00000492909 M0QYV0 167 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 NRP1O14786 923 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 TADA2AO75478 443 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 MYBL1P10243 752 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 PCSK1P29120 753 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 NOP2P46087 812 aaKnown RBP14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 DEFB103AP81534 67 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 PPP1R26Q5T8A7 1209 aaPredicted RBP14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 ARHGAP17Q68EM7 881 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 MON1BQ7L1V2 547 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 OTOP2Q7RTS6 562 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 RHOT2Q8IXI1 618 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 SLC35F6Q8N357 371 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 B3GALNT2Q8NCR0 500 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 ARHGEF26Q96DR7 871 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 ALS2CR12Q96Q35 445 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 COLEC11Q9BWP8 271 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 ADAM22Q9P0K1 906 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 HCSTQ9UBK5 93 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 ADAM28Q9UKQ2 775 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 PCDHB8Q9UN66 801 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 FAN1Q9Y2M0 1017 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 CAPN6Q9Y6Q1 641 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 PTPRSQ13332 1948 aa14.92□□□□□ -0.02
PDZRN3-210ENST00000492909 FGBP02675 491 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms