RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 CNKSR1Q969H4 720 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 EEF2KMTQ96G04 330 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 RBM18Q96H35 190 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 TSGA13Q96PP4 275 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 ALS2CR12Q96Q35 445 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 TM9SF2Q99805 663 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SLX1AQ9BQ83 275 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 KIAA1683Q9H0B3 1180 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 DEFB129Q9H1M3 183 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 BHMT2Q9H2M3 363 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 MLXIPQ9HAP2 919 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 FANCFQ9NPI8 374 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 MED4Q9NPJ6 270 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 DZANK1Q9NVP4 752 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 C14orf119Q9NWQ9 140 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 AIPL1Q9NZN9 384 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 C6orf203Q9P0P8 240 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 RNF14Q9UBS8 474 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SUN2Q9UH99 717 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SEPT9Q9UHD8 586 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 PCSK1NQ9UHG2 260 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 SH3BGRL2Q9UJC5 107 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 VAV3Q9UKW4 847 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 NENFQ9UMX5 172 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 HYOU1Q9Y4L1 999 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 PCDHAC2Q9Y5I4 1007 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 CAPN6Q9Y6Q1 641 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 DUSP10Q9Y6W6 482 aa4.03□□□□□ -1.76
ATPAF1-206ENST00000492233 UBE4BO95155 1302 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 LTBP3Q9NS15 1303 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 IGLV3-22A0A075B6J6 115 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 A0A087X0M5 115 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 NPHP3-ACAD11A0A0J9YXS1 232 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 A0A1B0GX30 115 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 A0A1W2PRG0 241 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 MACROD2A1Z1Q3 448 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 GRID2IPA4D2P6 1211 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 SPDYE3A6NKU9 549 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 LRRIQ3A6PVS8 624 aaPredicted RBP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 TISP43B9A030 160 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 B9A039 149 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 FAM86B1E9PN63 330 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 H0YIN7 160 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 PLOD2O00469 737 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 CES2O00748 559 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 ZNF185O15231 689 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 EIF3DO15371 548 aaKnown RBP eCLIP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 MSH4O15457 936 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 NCK2O43639 380 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 CALUO43852 315 aaPredicted RBP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 GRIN3BO60391 1043 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 DOK2O60496 412 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 SRGAP2O75044 1071 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 EFCAB14O75071 495 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 CILPO75339 1184 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 RPS6KA5O75582 802 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 FSBPO95073 299 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 GH2P01242 217 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 AFPP02771 609 aaKnown RBP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 FAM86B2P0C5J1 330 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 ALOX12P18054 663 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 RPL13P26373 211 aaKnown RBP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 TNFRSF8P28908 595 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 HOXD13P35453 343 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 PIK3CBP42338 1070 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 CTCFP49711 727 aaPredicted RBP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 CASP5P51878 434 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 CACNB3P54284 484 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 SLC12A2P55011 1212 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 PSMC6P62333 389 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 PPP2R2AP63151 447 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 JAG1P78504 1218 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 C2orf54Q08AI8 447 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 AP1B1Q10567 949 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 TCP10Q12799 353 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 RRP1BQ14684 758 aaKnown RBP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 EPHA7Q15375 998 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 TEAD4Q15561 434 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 NAB2Q15742 525 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 SMAD1Q15797 465 aaKnown RBP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 SLC18A3Q16572 532 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 KNOP1Q1ED39 458 aaKnown RBP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 SHROOM1Q2M3G4 852 aaPredicted RBP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 ARL13BQ3SXY8 428 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 GNPTABQ3T906 1256 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 GLE1Q53GS7 698 aaKnown RBP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 TDRD12Q587J7 1177 aaKnown RBP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 FAM209BQ5JX69 171 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 C10orf76Q5T2E6 689 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 RNF220Q5VTB9 566 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 KLHDC7AQ5VTJ3 777 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 IZUMO3Q5VZ72 239 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 SLC30A6Q6NXT4 461 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 POTEAQ6S8J7 498 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 CCBE1Q6UXH8 406 aaPredicted RBP4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 UNC5AQ6ZN44 842 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 USP51Q70EK9 711 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 OVCH2Q7RTZ1 564 aa4.02□□□□□ -1.77
ATPAF1-206ENST00000492233 SAMD7Q7Z3H4 446 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms