RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-208	ENST00000491541	DNAL1	Q4LDG9	190 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	CCDC89	Q8N998	374 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	DGCR14	Q96DF8	476 aa	Known RBP	10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	FAIM	Q9NVQ4	179 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	UBAP1	Q9NZ09	502 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	SCOC	Q9UIL1	159 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	STX8	Q9UNK0	236 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	PTPN22	Q9Y2R2	807 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	PCDHAC2	Q9Y5I4	1007 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	UQCRB	P14927	111 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	BRAF	P15056	766 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	RFC5	P40937	340 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	CACNA2D1	P54289	1103 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	C1QBP	Q07021	282 aa	Known RBP	10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	HERC3	Q15034	1050 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	ZRSR2	Q15696	482 aa	Known RBP	10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	SPATS1	Q496A3	300 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	KRT39	Q6A163	491 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	CROCCP3	Q8IVE0	287 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	LSM14A	Q8ND56	463 aa	Known RBP	10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	PLEKHO2	Q8TD55	490 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	PANX3	Q96QZ0	392 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	NDN	Q99608	321 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	VCX3B	Q9H321	246 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	VCX3A	Q9NNX9	186 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	ATG7	O95352	703 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	SERPINA6	P08185	405 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	PTPN2	P17706	415 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	POLD1	P28340	1107 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	MARCKSL1	P49006	195 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	CDC16	Q13042	620 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	FXN	Q16595	210 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	SIAH1	Q8IUQ4	282 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	UCMA	Q8WVF2	138 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	FGD4	Q96M96	766 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	TUBGCP5	Q96RT8	1024 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	MRPS26	Q9BYN8	205 aa	Known RBP	10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	SQOR	Q9Y6N5	450 aa		10.82	□□□□□ -0.68
SREBF2-208	ENST00000491541	DENND3	A2RUS2	1198 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	POTEM	A6NI47	508 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	ACSL3	O95573	720 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	VIL1	P09327	827 aa	Known RBP	10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	ANPEP	P15144	967 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	NAB1	Q13506	487 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	MAPK6	Q16659	721 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	KYNU	Q16719	465 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	MIPOL1	Q8TD10	442 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	U2AF1L4	Q8WU68	220 aa	Known RBP	10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	GAB3	Q8WWW8	586 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	USP29	Q9HBJ7	922 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	ANGPTL2	Q9UKU9	493 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	MYLK	Q15746	1914 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	TFAP2A	P05549	437 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	GSTT1	P30711	240 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	KRT17	Q04695	432 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	BTG3	Q14201	252 aa	Predicted RBP	10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	DDB1	Q16531	1140 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	RBM26	Q5T8P6	1007 aa	Known RBP	10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	DSTYK	Q6XUX3	929 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	ILDR2	Q71H61	639 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	NLRP9	Q7RTR0	991 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	NYX	Q9GZU5	481 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	PCDH18	Q9HCL0	1135 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	SHMT1	P34896	483 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	ITGA8	P53708	1063 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	SLC1A5	Q15758	541 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	CES4A	Q5XG92	561 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	RINL	Q6ZS11	566 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	SLC44A1	Q8WWI5	657 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	SPIRE2	Q8WWL2	714 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	S100A14	Q9HCY8	104 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	NKIRAS1	Q9NYS0	192 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	C6orf203	Q9P0P8	240 aa	Predicted RBP	10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	TEX264	Q9Y6I9	313 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541		E9PQ18	207 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	ATP9A	O75110	1047 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	FBXO21	O94952	628 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	STBD1	O95210	358 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	PRKCG	P05129	697 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	RRM1	P23921	792 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	NAPA	P54920	295 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	RPS3A	P61247	264 aa	Known RBP	10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	RCN2	Q14257	317 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	RNF220	Q5VTB9	566 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	RWDD4	Q6NW29	188 aa	Known RBP	10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	SYCP3	Q8IZU3	236 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	APOPT1	Q96IL0	206 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	ZNF641	Q96N77	438 aa	Predicted RBP	10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	PIGS	Q96S52	555 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	PITPNM3	Q9BZ71	974 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	KLC2	Q9H0B6	622 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	PCDHGC3	Q9UN70	934 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	DMTF1	Q9Y222	760 aa		10.81	□□□□□ -0.68
SREBF2-208	ENST00000491541	TRDMT1	O14717	391 aa	Known RBP	10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	PYGB	P11216	843 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	ANGEL2	Q5VTE6	544 aa	Known RBP	10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms