RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 NLRP12P59046 1061 aa19.13■□□□□ 0.65
YIPF3-208ENST00000490447 CEBPZQ03701 1054 aaKnown RBP19.13■□□□□ 0.65
YIPF3-208ENST00000490447 DMWDQ09019 674 aa19.13■□□□□ 0.65
YIPF3-208ENST00000490447 ALCAMQ13740 583 aa19.13■□□□□ 0.65
YIPF3-208ENST00000490447 CC2D1AQ6P1N0 951 aaPredicted RBP19.13■□□□□ 0.65
YIPF3-208ENST00000490447 CEP68Q76N32 757 aa19.13■□□□□ 0.65
YIPF3-208ENST00000490447 CLIC6Q96NY7 704 aa19.13■□□□□ 0.65
YIPF3-208ENST00000490447 STRA6Q9BX79 667 aa19.13■□□□□ 0.65
YIPF3-208ENST00000490447 OLFML3Q9NRN5 406 aa19.13■□□□□ 0.65
YIPF3-208ENST00000490447 GKN1Q9NS71 199 aa19.13■□□□□ 0.65
YIPF3-208ENST00000490447 DDX43Q9NXZ2 648 aaKnown RBP19.13■□□□□ 0.65
YIPF3-208ENST00000490447 UXTQ9UBK9 157 aaPredicted RBP19.13■□□□□ 0.65
YIPF3-208ENST00000490447 KRT19P08727 400 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 GARTP22102 1010 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 STAT6P42226 847 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 RPL10AP62906 217 aaKnown RBP19.12■□□□□ 0.65
YIPF3-208ENST00000490447 AMPD2Q01433 879 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 GRSF1Q12849 480 aaKnown RBP eCLIP19.12■□□□□ 0.654e-7■■□□□ 13.7
YIPF3-208ENST00000490447 RUNX3Q13761 415 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 WDR44Q5JSH3 913 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 TMEM86AQ8N2M4 240 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 PDCL2Q8N4E4 241 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 CSGALNACT2Q8N6G5 542 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 LRRC52Q8N7C0 313 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 C1orf127Q8N9H9 656 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 LEO1Q8WVC0 666 aaPredicted RBP19.12■□□□□ 0.65
YIPF3-208ENST00000490447 DNAJC19Q96DA6 116 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 ACBD6Q9BR61 282 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 TDP1Q9NUW8 608 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 TMLHEQ9NVH6 421 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 ITGA11Q9UKX5 1188 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.12■□□□□ 0.65
YIPF3-208ENST00000490447 SCN1AP35498 2009 aa19.12■□□□□ 0.65
YIPF3-208ENST00000490447 ANK1P16157 1881 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 HRO43593 1189 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 F11P03951 625 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 TMEM191BP0C7N4 346 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 SRSF5Q13243 272 aaKnown RBP19.11■□□□□ 0.65
YIPF3-208ENST00000490447 CUL4AQ13619 759 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 TXNDC8Q6A555 127 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 NETO1Q8TDF5 533 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 EXOC4Q96A65 974 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 EBF3Q9H4W6 596 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 TMEM206Q9H813 350 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 SEMA4GQ9NTN9 838 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 L1RE1Q9UN81 338 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 CCL26Q9Y258 94 aa19.11■□□□□ 0.65
YIPF3-208ENST00000490447 TCHHQ07283 1943 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 GOLGA8IPA6NC78 632 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 GOLGA8JA6NMD2 632 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 SOBPA7XYQ1 873 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 ATG13O75143 517 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 HMGA1P17096 107 aaKnown RBP19.1■□□□□ 0.65
YIPF3-208ENST00000490447 ACAT1P24752 427 aaKnown RBP19.1■□□□□ 0.65
YIPF3-208ENST00000490447 GPR15P49685 360 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 WNT7BP56706 349 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 INTS6LQ5JSJ4 861 aaKnown RBP19.1■□□□□ 0.65
YIPF3-208ENST00000490447 TRIM68Q6AZZ1 485 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 TMEM150AQ86TG1 271 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 WDR5BQ86VZ2 330 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 SPATA2LQ8IUW3 424 aaPredicted RBP19.1■□□□□ 0.65
YIPF3-208ENST00000490447 STKLD1Q8NE28 680 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 USP13Q92995 863 aaPredicted RBP19.1■□□□□ 0.65
YIPF3-208ENST00000490447 FAM83CQ9BQN1 747 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 PCIF1Q9H4Z3 704 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 ABCB6Q9NP58 842 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 PANK4Q9NVE7 773 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 SNX9Q9Y5X1 595 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 NCOR2Q9Y618 2525 aa19.1■□□□□ 0.65
YIPF3-208ENST00000490447 DCDC2BA2VCK2 349 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 EXTL3O43909 919 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 FOXD2O60548 495 aaPredicted RBP19.09■□□□□ 0.65
YIPF3-208ENST00000490447 CYP2F1P24903 491 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 PCSK1P29120 753 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 HOXA6P31267 233 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 LHX1P48742 406 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 CASP5P51878 434 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 RBP5P82980 135 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 MYO1EQ12965 1108 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 RESTQ13127 1097 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 DDR2Q16832 855 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 SDHAF4Q5VUM1 108 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 FAM173BQ6P4H8 233 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 PRR23CQ6ZRP0 262 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 STXBP4Q6ZWJ1 553 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 MON1AQ86VX9 555 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 ADGRF2Q8IZF7 708 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 TOP6BLQ8N6T0 577 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 TTC16Q8NEE8 873 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 ZSWIM2Q8NEG5 633 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 SPATA18Q8TC71 538 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 ANKRD36BP1Q96IX9 119 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 CBWD1Q9BRT8 395 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 PANK2Q9BZ23 570 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 MTMR12Q9C0I1 747 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 TRPC7Q9HCX4 862 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 HPS4Q9NQG7 708 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 C2orf42Q9NWW7 574 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 GTF3C4Q9UKN8 822 aa19.09■□□□□ 0.65
YIPF3-208ENST00000490447 SLC8A2Q9UPR5 921 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms