RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.81□□□□□ -0.84
ECM1-205ENST00000490346 DOCK6Q96HP0 2047 aa9.81□□□□□ -0.84
ECM1-205ENST00000490346 CLUHO75153 1309 aa9.81□□□□□ -0.84
ECM1-205ENST00000490346 A8MXQ7 604 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 AFPP02771 609 aaKnown RBP9.8□□□□□ -0.84
ECM1-205ENST00000490346 HAPLN1P10915 354 aaPredicted RBP9.8□□□□□ -0.84
ECM1-205ENST00000490346 CD58P19256 250 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 CYP2F1P24903 491 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 SSTR3P32745 418 aaPredicted RBP9.8□□□□□ -0.84
ECM1-205ENST00000490346 MTIF2P46199 727 aaKnown RBP9.8□□□□□ -0.84
ECM1-205ENST00000490346 ALDH1A3P47895 512 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 TUFMP49411 452 aaKnown RBP9.8□□□□□ -0.84
ECM1-205ENST00000490346 CYP27A1Q02318 531 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 TYRO3Q06418 890 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 KCNH2Q12809 1159 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 SMARCB1Q12824 385 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 PLD1Q13393 1074 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 ORC1Q13415 861 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 MDH1BQ5I0G3 518 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 WDR44Q5JSH3 913 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 FAM171BQ6P995 826 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 GET4Q7L5D6 327 aaPredicted RBP9.8□□□□□ -0.84
ECM1-205ENST00000490346 SPATA2LQ8IUW3 424 aaPredicted RBP9.8□□□□□ -0.84
ECM1-205ENST00000490346 ELMOD1Q8N336 334 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 MYCBPAPQ8TBZ2 947 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 SPPL2BQ8TCT7 592 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 TATDN2Q93075 761 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 MYLPFQ96A32 169 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 ARID3AQ99856 593 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 CORO1BQ9BR76 489 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 DNAJC25Q9H1X3 360 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 CD320Q9NPF0 282 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 SAMSN1Q9NSI8 373 aaKnown RBP9.8□□□□□ -0.84
ECM1-205ENST00000490346 CEP72Q9P209 647 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 HSFX1Q9UBD0 423 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 MAGEC2Q9UBF1 373 aaPredicted RBP9.8□□□□□ -0.84
ECM1-205ENST00000490346 NFE2L3Q9Y4A8 694 aa9.8□□□□□ -0.84
ECM1-205ENST00000490346 NOTCH4Q99466 2003 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 C19orf67A6NJJ6 358 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 C2CD4DB7Z1M9 353 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 LOC730098B7Z3J9 87 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 PMM2O15305 246 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 P4HA2O15460 535 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 RHOP08100 348 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 PTPN2P17706 415 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 PTPN1P18031 435 aaKnown RBP9.79□□□□□ -0.84
ECM1-205ENST00000490346 ATF6P18850 670 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 FSHRP23945 695 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 GPR15P49685 360 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 NDST1P52848 882 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 EPHB3P54753 998 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 CETN1Q12798 172 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 LRMPQ12912 555 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 PABPC1LQ4VXU2 614 aaKnown RBP9.79□□□□□ -0.84
ECM1-205ENST00000490346 SDHAF4Q5VUM1 108 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 IQCEQ6IPM2 695 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 C4orf50Q6ZRC1 276 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 ACOT1Q86TX2 421 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 FAM114A1Q8IWE2 563 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 HS6ST3Q8IZP7 471 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 GJD3Q8N144 294 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 B3GALNT2Q8NCR0 500 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 ITFG1Q8TB96 612 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 ENOX1Q8TC92 643 aaKnown RBP9.79□□□□□ -0.84
ECM1-205ENST00000490346 FAM200AQ8TCP9 573 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 GIPC2Q8TF65 315 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 PCED1BQ96HM7 432 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 ZNF512Q96ME7 567 aaPredicted RBP9.79□□□□□ -0.84
ECM1-205ENST00000490346 NT5C1BQ96P26 610 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 CYP3A43Q9HB55 503 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 ABCB6Q9NP58 842 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 NR2E1Q9Y466 385 aa9.79□□□□□ -0.84
ECM1-205ENST00000490346 TTC28Q96AY4 2481 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 SYCE3A1L190 88 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 KCNJ18B7U540 433 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 CLDN5O00501 218 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 MYL4P12829 197 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 PRKCSHP14314 528 aaPredicted RBP9.78□□□□□ -0.84
ECM1-205ENST00000490346 BDNFP23560 247 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 GBP2P32456 591 aaPredicted RBP9.78□□□□□ -0.84
ECM1-205ENST00000490346 INCA1Q0VD86 236 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 CUL2Q13617 745 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 KCNJ12Q14500 433 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 VEPH1Q14D04 833 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 MAPRE1Q15691 268 aaKnown RBP9.78□□□□□ -0.84
ECM1-205ENST00000490346 MAN2A1Q16706 1144 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 SLC5A9Q2M3M2 681 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 CFAP221Q4G0U5 840 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 ANO6Q4KMQ2 910 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 PDZD4Q76G19 769 aaPredicted RBP9.78□□□□□ -0.84
ECM1-205ENST00000490346 OTOP3Q7RTS5 596 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 DNAJB7Q7Z6W7 309 aaPredicted RBP9.78□□□□□ -0.84
ECM1-205ENST00000490346 UNC93AQ86WB7 457 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 SCN4BQ8IWT1 228 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 TDRD5Q8NAT2 981 aaKnown RBP9.78□□□□□ -0.84
ECM1-205ENST00000490346 STKLD1Q8NE28 680 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 LMO3Q8TAP4 145 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 GPR152Q8TDT2 470 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 ING5Q8WYH8 240 aa9.78□□□□□ -0.84
ECM1-205ENST00000490346 FUBP3Q96I24 572 aaKnown RBP eCLIP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms