RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 SPSB4Q96A44 273 aa6.89□□□□□ -1.31
VPS26A-206ENST00000489794 TMEM125Q96AQ2 219 aa6.89□□□□□ -1.31
VPS26A-206ENST00000489794 BRIP1Q9BX63 1249 aa6.89□□□□□ -1.31
VPS26A-206ENST00000489794 NAA15Q9BXJ9 866 aaKnown RBP6.89□□□□□ -1.31
VPS26A-206ENST00000489794 STARD7Q9NQZ5 370 aa6.89□□□□□ -1.31
VPS26A-206ENST00000489794 VSX1Q9NZR4 365 aaPredicted RBP6.89□□□□□ -1.31
VPS26A-206ENST00000489794 COL20A1Q9P218 1284 aa6.89□□□□□ -1.31
VPS26A-206ENST00000489794 MATN3O15232 486 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 CCP110O43303 1012 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 ADH4P08319 380 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 IFIT2P09913 472 aaKnown RBP6.88□□□□□ -1.31
VPS26A-206ENST00000489794 PPIFP30405 207 aaKnown RBP6.88□□□□□ -1.31
VPS26A-206ENST00000489794 AVPR1BP47901 424 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 TOB1P50616 345 aaPredicted RBP6.88□□□□□ -1.31
VPS26A-206ENST00000489794 CASP5P51878 434 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 BRD3Q15059 726 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 INSCQ1MX18 579 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 C3orf38Q5JPI3 329 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 CRIP3Q6Q6R5 217 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 GGNQ86UU5 652 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 LNX2Q8N448 690 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 SAMD3Q8N6K7 520 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 PTCD3Q96EY7 689 aaKnown RBP6.88□□□□□ -1.31
VPS26A-206ENST00000489794 LRIG1Q96JA1 1093 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 PPP1R9BQ96SB3 815 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 MYD88Q99836 296 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 MESP1Q9BRJ9 268 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 PTDSS2Q9BVG9 487 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 TTYH3Q9C0H2 523 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 MS4A7Q9GZW8 240 aaPredicted RBP6.88□□□□□ -1.31
VPS26A-206ENST00000489794 XPNPEP3Q9NQH7 507 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 PHTF1Q9UMS5 762 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 CORO2BQ9UQ03 480 aa6.88□□□□□ -1.31
VPS26A-206ENST00000489794 UNC119BA6NIH7 251 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 ZNF202O95125 648 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 ZFPL1O95159 310 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 PARP1P09874 1014 aaKnown RBP6.87□□□□□ -1.31
VPS26A-206ENST00000489794 SRGNP10124 158 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 EGR2P11161 476 aaPredicted RBP6.87□□□□□ -1.31
VPS26A-206ENST00000489794 TNFRSF1AP19438 455 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 CD6P30203 668 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 KRTAP10-2P60368 255 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 RPS16P62249 146 aaKnown RBP6.87□□□□□ -1.31
VPS26A-206ENST00000489794 MC2RQ01718 297 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 ITIH3Q06033 890 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 ABHD18Q0P651 414 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 TP53BP2Q13625 1128 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 CD300EQ496F6 205 aaPredicted RBP6.87□□□□□ -1.31
VPS26A-206ENST00000489794 FNDC7Q5VTL7 733 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 USP51Q70EK9 711 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 YAF2Q8IY57 180 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 LCORLQ8N3X6 602 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 SMCR8Q8TEV9 937 aaPredicted RBP6.87□□□□□ -1.31
VPS26A-206ENST00000489794 ELAC2Q9BQ52 826 aaKnown RBP6.87□□□□□ -1.31
VPS26A-206ENST00000489794 DHX36Q9H2U1 1008 aaKnown RBP6.87□□□□□ -1.31
VPS26A-206ENST00000489794 SERHL2Q9H4I8 314 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 MMRN2Q9H8L6 949 aa6.87□□□□□ -1.31
VPS26A-206ENST00000489794 MRPS18AQ9NVS2 196 aaKnown RBP6.87□□□□□ -1.31
VPS26A-206ENST00000489794 TESQ9UGI8 421 aaKnown RBP6.87□□□□□ -1.31
VPS26A-206ENST00000489794 DCLK1O15075 740 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 THAP12O43422 761 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 NARSO43776 548 aaKnown RBP6.86□□□□□ -1.31
VPS26A-206ENST00000489794 FZD7O75084 574 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 CHRM3P20309 590 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 PRIM2P49643 509 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 NEK3P51956 506 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 BTKQ06187 659 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 ZNF543Q08ER8 600 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 PUM1Q14671 1186 aaKnown RBP eCLIP6.86□□□□□ -1.31
VPS26A-206ENST00000489794 LONRF1Q17RB8 773 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 DCAF12L1Q5VU92 463 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 ICE2Q659A1 982 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 TMEM108Q6UXF1 575 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 ACRBPQ8NEB7 543 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 GJA10Q969M2 543 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 COQ10AQ96MF6 247 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 NLRC4Q9NPP4 1024 aa6.86□□□□□ -1.31
VPS26A-206ENST00000489794 LOC102723971A0A1B0GUV8 181 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 RASA4BC9J798 803 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 NPIPB8E9PQR5 432 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 RASA4O43374 803 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 LPXNO60711 386 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 RASSF9O75901 435 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 ANXA2P07355 339 aaKnown RBP6.85□□□□□ -1.31
VPS26A-206ENST00000489794 TXNP10599 105 aaKnown RBP6.85□□□□□ -1.31
VPS26A-206ENST00000489794 ITGAMP11215 1152 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 TACR2P21452 398 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 NXPH1P58417 271 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 LILRA4P59901 499 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 KRT17Q04695 432 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 OS9Q13438 667 aaPredicted RBP6.85□□□□□ -1.31
VPS26A-206ENST00000489794 BOP1Q14137 746 aaKnown RBP6.85□□□□□ -1.31
VPS26A-206ENST00000489794 E2F2Q14209 437 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 PLA1AQ53H76 456 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 GPR149Q86SP6 731 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 FAM186BQ8IYM0 893 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 OR56A3Q8NH54 315 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 BRI3BPQ8WY22 251 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 FAM136AQ96C01 138 aa6.85□□□□□ -1.31
VPS26A-206ENST00000489794 IQCDQ96DY2 449 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms