RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	HFE2	Q6ZVN8	426 aa		11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	SV2A	Q7L0J3	742 aa		11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	BMP8A	Q7Z5Y6	402 aa		11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	OR6B3	Q8NGW1	331 aa		11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	TAF4B	Q92750	862 aa		11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	TCEAL4	Q96EI5	215 aa		11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	MCRS1	Q96EZ8	462 aa		11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	ASIC4	Q96FT7	647 aa		11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	SYT15	Q9BQS2	421 aa		11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	PI4K2A	Q9BTU6	479 aa		11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	MKNK1	Q9BUB5	465 aa		11.86	□□□□□ -0.51
GGA1-222	ENST00000489772	ANK1	P16157	1881 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	MYBPHL	A2RUH7	354 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	SLC16A3	O15427	465 aa	Known RBP	11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	HCRT	O43612	131 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	STX10	O60499	249 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	VNN1	O95497	513 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	TRIM49	P0CI25	452 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	TRIM49C	P0CI26	452 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	SRF	P11831	508 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	COL9A1	P20849	921 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	GTF2H1	P32780	548 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	CCR2	P41597	374 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	GCLM	P48507	274 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	PSMC1	P62191	440 aa	Known RBP	11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	RPL10A	P62906	217 aa	Known RBP	11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	CFAP221	Q4G0U5	840 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	C1orf220	Q5T0J3	134 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	ANKRD40	Q6AI12	368 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	FAM171B	Q6P995	826 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	TMC8	Q8IU68	726 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	SUGP1	Q8IWZ8	645 aa	Known RBP	11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	FGF14	Q92915	247 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	EEF2KMT	Q96G04	330 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	GCNA	Q96QF7	691 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	PKMYT1	Q99640	499 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	LPIN3	Q9BQK8	851 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	MRPL45	Q9BRJ2	306 aa	Known RBP	11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	LRRC3	Q9BY71	257 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	IMPG2	Q9BZV3	1241 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	GPR88	Q9GZN0	384 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	FBXL21	Q9UKT6	434 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	HCN4	Q9Y3Q4	1203 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772	TCHH	Q07283	1943 aa		11.85	□□□□□ -0.51
GGA1-222	ENST00000489772		A0A1W2PRU2	124 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772		A8MXQ7	604 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	NARS	O43776	548 aa	Known RBP	11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	ECI2	O75521	394 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	GJA1	P17302	382 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	ATF6	P18850	670 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	CCNE1	P24864	410 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	CYP2F1	P24903	491 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	PIK3CA	P42336	1068 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	PMS1	P54277	932 aa	Known RBP	11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	CYP27A1	Q02318	531 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	MORC3	Q14149	939 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	TEAD2	Q15562	447 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	FAM78A	Q5JUQ0	283 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	CCDC150	Q8NCX0	1101 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	SHKBP1	Q8TBC3	707 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	MYCBPAP	Q8TBZ2	947 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	GPR152	Q8TDT2	470 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	GIPC2	Q8TF65	315 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	RPP25	Q9BUL9	199 aa	Known RBP	11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	ATXN3L	Q9H3M9	355 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	SLITRK6	Q9H5Y7	841 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	SMYD3	Q9H7B4	428 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	MMRN2	Q9H8L6	949 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	TMEM8A	Q9HCN3	771 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	CRTAC1	Q9NQ79	661 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	DENND4A	Q7Z401	1863 aa		11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.84	□□□□□ -0.51
GGA1-222	ENST00000489772	SCN1A	P35498	2009 aa		11.83	□□□□□ -0.51
GGA1-222	ENST00000489772	TRIM49B	A6NDI0	452 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	BIN1	O00499	593 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	ATP2C2	O75185	946 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	MOSPD3	O75425	235 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	ASS1	P00966	412 aa	Known RBP	11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	HLA-DRA	P01903	254 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	CFH	P08603	1231 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	PTPN1	P18031	435 aa	Known RBP	11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	GABRR2	P28476	465 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	CDC25C	P30307	473 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	CDH8	P55286	799 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	MCCD1	P59942	119 aa	Predicted RBP	11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	PPP3CA	Q08209	521 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	CAMK4	Q16566	473 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	DDR2	Q16832	855 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	ARHGAP15	Q53QZ3	475 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	MDH1B	Q5I0G3	518 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	KRT39	Q6A163	491 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	KLHL10	Q6JEL2	608 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	VSTM1	Q6UX27	236 aa		11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.83	□□□□□ -0.52
GGA1-222	ENST00000489772	FBXL6	Q8N531	539 aa		11.83	□□□□□ -0.52

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