RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TCERG1LQ5VWI1 586 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 C4orf50Q6ZRC1 276 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 DNAJB7Q7Z6W7 309 aaPredicted RBP18.54■□□□□ 0.56
MDC1-206ENST00000489540 SPATA2LQ8IUW3 424 aaPredicted RBP18.54■□□□□ 0.56
MDC1-206ENST00000489540 TTC9BQ8N6N2 239 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 TAS1R2Q8TE23 839 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 EDAQ92838 391 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 PSMG2Q969U7 264 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 PI4K2AQ9BTU6 479 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 DNAJC25Q9H1X3 360 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 KCNK12Q9HB15 430 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 GDE1Q9NZC3 331 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 RWDD2AQ9UIY3 292 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 SORCS3Q9UPU3 1222 aa18.54■□□□□ 0.56
MDC1-206ENST00000489540 BDP1A6H8Y1 2624 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 A8MXQ7 604 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 HCRTO43612 131 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 ATP2C2O75185 946 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 SOAT2O75908 522 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 FGF19O95750 216 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 MXI1P50539 228 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 STX17P56962 302 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 RPL10AP62906 217 aaKnown RBP18.53■□□□□ 0.56
MDC1-206ENST00000489540 ZXDAP98168 799 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 DCAF17Q5H9S7 520 aaPredicted RBP18.53■□□□□ 0.56
MDC1-206ENST00000489540 PRSS36Q5K4E3 855 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 FBXL13Q8NEE6 735 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 FAM200AQ8TCP9 573 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 FAXDC2Q96IV6 333 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 SMYD3Q9H7B4 428 aa18.53■□□□□ 0.56
MDC1-206ENST00000489540 MAGEC2Q9UBF1 373 aaPredicted RBP18.53■□□□□ 0.56
MDC1-206ENST00000489540 ASGR2P07307 311 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 PTPN1P18031 435 aaKnown RBP18.52■□□□□ 0.56
MDC1-206ENST00000489540 CDR1P51861 262 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 CDH8P55286 799 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 MTMR3Q13615 1198 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 TAF12Q16514 161 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 SLC5A9Q2M3M2 681 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 CCDC40Q4G0X9 1142 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 NPAS3Q8IXF0 933 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 UBALD2Q8IYN6 164 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 HS6ST3Q8IZP7 471 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 MYCBPAPQ8TBZ2 947 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 LRRC3Q9BY71 257 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 CYP3A43Q9HB55 503 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 CRTAC1Q9NQ79 661 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 RAB20Q9NX57 234 aa18.52■□□□□ 0.56
MDC1-206ENST00000489540 MUC3AQ02505 3323 aa18.52■□□□□ 0.55
MDC1-206ENST00000489540 ANHXE9PGG2 379 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 MYL4P12829 197 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 ATF6P18850 670 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 CYP2F1P24903 491 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 MAGEA11P43364 429 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 PSMC1P62191 440 aaKnown RBP18.51■□□□□ 0.55
MDC1-206ENST00000489540 NOP14P78316 857 aaKnown RBP18.51■□□□□ 0.55
MDC1-206ENST00000489540 TDGQ13569 410 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 WDR44Q5JSH3 913 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 SPOPLQ6IQ16 392 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 VSTM1Q6UX27 236 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 MTSS1LQ765P7 747 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 GPT2Q8TD30 523 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 SLC35C1Q96A29 364 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 TNIP3Q96KP6 325 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 SRRTQ9BXP5 876 aaKnown RBP18.51■□□□□ 0.55
MDC1-206ENST00000489540 GPR88Q9GZN0 384 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 COQ4Q9Y3A0 265 aa18.51■□□□□ 0.55
MDC1-206ENST00000489540 GPR37L1O60883 481 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 CCR2P41597 374 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 ASPAP45381 313 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 SCARA5Q6ZMJ2 495 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 UNC93AQ86WB7 457 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 TMC8Q8IU68 726 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 GIPC2Q8TF65 315 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 ING5Q8WYH8 240 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 MYLPFQ96A32 169 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 ELMO3Q96BJ8 720 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 TCEAL4Q96EI5 215 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 MCRS1Q96EZ8 462 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 PCED1BQ96HM7 432 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 LPIN3Q9BQK8 851 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 BCO2Q9BYV7 579 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 NIF3L1Q9GZT8 377 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 SDCBP2Q9H190 292 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 APOBEC3GQ9HC16 384 aaKnown RBP18.5■□□□□ 0.55
MDC1-206ENST00000489540 DACH1Q9UI36 760 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 NME7Q9Y5B8 376 aa18.5■□□□□ 0.55
MDC1-206ENST00000489540 PMM2O15305 246 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 MBD3O95983 291 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CSH1P0DML2 217 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CSH2P0DML3 217 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CEBPBP17676 345 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 TRIM21P19474 475 aaKnown RBP18.49■□□□□ 0.55
MDC1-206ENST00000489540 RAP1GAPP47736 663 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CYP27A1Q02318 531 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 DDR2Q16832 855 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CBWD6Q4V339 395 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 MDH1BQ5I0G3 518 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CBWD3Q5JTY5 395 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 TMEM31Q5JXX7 168 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CBWD5Q5RIA9 395 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms