RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 SCLT1Q96NL6 688 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 IQCGQ9H095 443 aaKnown RBP9.34□□□□□ -0.91
CSMD2-209ENST00000489419 SEMA4AQ9H3S1 761 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 MINDY3Q9H8M7 445 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 CHST7Q9NS84 486 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 ASIC3Q9UHC3 531 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 KIAA1257Q9ULG3 409 aa9.34□□□□□ -0.91
CSMD2-209ENST00000489419 DRG1Q9Y295 367 aaKnown RBP9.34□□□□□ -0.91
CSMD2-209ENST00000489419 ATXN2Q99700 1313 aaKnown RBP9.33□□□□□ -0.92
CSMD2-209ENST00000489419 IQCA1LA6NCM1 817 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 SIGLEC16A6NMB1 481 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 GPR25O00155 361 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 NDUFAB1O14561 156 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 B4GALT5O43286 388 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 WEE2P0C1S8 567 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 STAG3L1P0CL83 205 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 HOXD8P13378 290 aaPredicted RBP9.33□□□□□ -0.92
CSMD2-209ENST00000489419 CD58P19256 250 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 GTF2A2P52657 109 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 MAGOHP61326 146 aaKnown RBP9.33□□□□□ -0.92
CSMD2-209ENST00000489419 CDC42EP1Q00587 391 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 GUCY1A3Q02108 690 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 ACAP1Q15027 740 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 C2CD6Q53TS8 623 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 MFSD5Q6N075 450 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 LLGL2Q6P1M3 1020 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 PHLDB2Q86SQ0 1253 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 SYT17Q9BSW7 474 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 FRMD8P1Q9BZ68 369 aaPredicted RBP9.33□□□□□ -0.92
CSMD2-209ENST00000489419 SIX4Q9UIU6 781 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 GLTPD2A6NH11 291 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 LACTBL1A8MY62 500 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 TP73O15350 636 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 ZSCAN9O15535 394 aaPredicted RBP9.33□□□□□ -0.92
CSMD2-209ENST00000489419 TCEA3O75764 348 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 FAM107AO95990 144 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 ATF2P15336 505 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 ADORA2AP29274 412 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 HPDP32754 393 aaPredicted RBP9.33□□□□□ -0.92
CSMD2-209ENST00000489419 RPL7AP62424 266 aaKnown RBP9.33□□□□□ -0.92
CSMD2-209ENST00000489419 SNX1Q13596 522 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 ZNF268Q14587 947 aaPredicted RBP9.33□□□□□ -0.92
CSMD2-209ENST00000489419 CRYMQ14894 314 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 TNFAIP8L3Q5GJ75 292 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 SCARA3Q6AZY7 606 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 ZNF365Q70YC5 407 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 ZNF410Q86VK4 478 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 C1orf127Q8N9H9 656 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 TFAP2BQ92481 460 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 SLITRK1Q96PX8 696 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 HERPUD2Q9BSE4 406 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 ANAPC5Q9UJX4 755 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 C2CD2Q9Y426 696 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 IVNS1ABPQ9Y6Y0 642 aa9.33□□□□□ -0.92
CSMD2-209ENST00000489419 RGS16O15492 202 aaPredicted RBP9.32□□□□□ -0.92
CSMD2-209ENST00000489419 PYGLP06737 847 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 IQCF3P0C7M6 154 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 CXCL8P10145 99 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 YBX3P16989 372 aaKnown RBP eCLIP9.32□□□□□ -0.92
CSMD2-209ENST00000489419 ADCY8P40145 1251 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 CCT5P48643 541 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 RAD23BP54727 409 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 IRF5Q13568 498 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 MTHFD1LQ6UB35 978 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 MICALCLQ6ZW33 695 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 SNRNP27Q8WVK2 155 aaKnown RBP9.32□□□□□ -0.92
CSMD2-209ENST00000489419 SERPINB12Q96P63 405 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 C16orf70Q9BSU1 422 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 KATNBL1Q9H079 304 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 MIS12Q9H081 205 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 PDZD7Q9H5P4 517 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.32□□□□□ -0.92
CSMD2-209ENST00000489419 ITGA11Q9UKX5 1188 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 USTQ9Y2C2 406 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 A0A087WZ62 844 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 GMNCA6NCL1 334 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 H3BRB1 525 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 PDHXO00330 501 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 RASGRF2O14827 1237 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 TRAPPC3O43617 180 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 HMGCRP04035 888 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 SHBGP04278 402 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 GJB1P08034 283 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 KRT7P08729 469 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 FAM200BP0CF97 657 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 CYP2C8P10632 490 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 VDRP11473 427 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 MMP13P45452 471 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 GABRB2P47870 512 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 MNAT1P51948 309 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 FKBP1BP68106 108 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 PCBP1Q15365 356 aaKnown RBP eCLIP9.32□□□□□ -0.92
CSMD2-209ENST00000489419 CNGA2Q16280 664 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 WDR72Q3MJ13 1102 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 IQSEC1Q6DN90 963 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 NLRP14Q86W24 1093 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 AFG1LQ8WV93 481 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 MS4A4AQ96JQ5 239 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 MCEEQ96PE7 176 aa9.32□□□□□ -0.92
CSMD2-209ENST00000489419 CCT8L2Q96SF2 557 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms