RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 GAREM2Q75VX8 874 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 RSRC2Q7L4I2 434 aaKnown RBP8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 CATIPQ7Z7H3 387 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 C12orf40Q86WS4 652 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 MCEMP1Q8IX19 187 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 CNNM3Q8NE01 707 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 IGSF8Q969P0 613 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 TMEM87BQ96K49 555 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 LURAP1Q96LR2 239 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 MTMR9Q96QG7 549 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 FDXACB1Q9BRP7 624 aaPredicted RBP8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 INO80BQ9C086 356 aaPredicted RBP8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 SMG9Q9H0W8 520 aaKnown RBP8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 BOLA2Q9H3K6 86 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 ECT2Q9H8V3 914 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 CBX8Q9HC52 389 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 ZNF302Q9NR11 478 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 CYP8B1Q9UNU6 501 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 IPPQ9Y573 584 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 SNX11Q9Y5W9 270 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 NOTCH1P46531 2555 aa8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 ARID1BQ8NFD5 2236 aaPredicted RBP8.33□□□□□ -1.08
EXOSC3-206ENST00000489414 MN1Q10571 1320 aaPredicted RBP8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 PKD1L1Q8TDX9 2849 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 TP53BP1Q12888 1972 aaPredicted RBP8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 ARHGAP10A1A4S6 786 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 MEI4A8MW99 385 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 NDUFS2O75306 463 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 USP12O75317 370 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 VPS4BO75351 444 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 CCNE2O96020 404 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 HOXA11P31270 313 aaPredicted RBP8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 DRP2Q13474 957 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 GPR158Q5T848 1215 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 THSD4Q6ZMP0 1018 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 CPA6Q8N4T0 437 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 ZNF454Q8N9F8 522 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 GALNT11Q8NCW6 608 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 C1orf216Q8TAB5 229 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 APPBP2Q92624 585 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 SDF4Q9BRK5 362 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 BACH2Q9BYV9 841 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 MIR1-1HGQ9H1L0 117 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 TUBD1Q9UJT1 453 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 PHTF1Q9UMS5 762 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 VPS4AQ9UN37 437 aa8.32□□□□□ -1.08
EXOSC3-206ENST00000489414 CDRT15L2A8MXV6 281 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 TRIM6-TRIM34B2RNG4 842 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 H0Y8X5 98 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 IPO5O00410 1097 aaKnown RBP8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 NADKO95544 446 aaPredicted RBP8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 LDLRP01130 860 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 CDC42EP1Q00587 391 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 IL9RQ01113 521 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 KCNAB2Q13303 367 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 PDGFRLQ15198 375 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 ANKS3Q6ZW76 656 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 FAM114A1Q8IWE2 563 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 TMEM57Q8N5G2 664 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 RIN3Q8TB24 985 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 SLC46A1Q96NT5 459 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 CD93Q9NPY3 652 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 KCNH7Q9NS40 1196 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 ENTPD4Q9Y227 616 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 HES2Q9Y543 173 aa8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 MAFBQ9Y5Q3 323 aaPredicted RBP8.31□□□□□ -1.08
EXOSC3-206ENST00000489414 ZNF638Q14966 1978 aaKnown RBP8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 CASTOR2A6NHX0 329 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 KCNK3O14649 394 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 IGHDP01880 384 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 TKTP29401 623 aaKnown RBP8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 CSNK1EP49674 416 aaKnown RBP8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 DUSP3P51452 185 aaPredicted RBP8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 MLLT10P55197 1068 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 SRSF6Q13247 344 aaKnown RBP8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 ITGB3BPQ13352 177 aaPredicted RBP8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 TUSC3Q13454 348 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 HDAC1Q13547 482 aaPredicted RBP8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 TPGS2Q68CL5 300 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 TAOK1Q7L7X3 1001 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 TRMT1LQ7Z2T5 733 aaKnown RBP8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 ZNF410Q86VK4 478 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 SFTPA1Q8IWL2 248 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 CKAP2LQ8IYA6 745 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 PNMA1Q8ND90 353 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 HTR3CQ8WXA8 447 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 GPATCH3Q96I76 525 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 DNAJC25Q9H1X3 360 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 ATXN3LQ9H3M9 355 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 TASP1Q9H6P5 420 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 IL1RAPL2Q9NP60 686 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 ECHDC1Q9NTX5 307 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 ANAPC4Q9UJX5 808 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 TNNQ9UQP3 1299 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 CCL26Q9Y258 94 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 GIT1Q9Y2X7 761 aa8.3□□□□□ -1.08
EXOSC3-206ENST00000489414 A0A1W2PNU3 283 aaPredicted RBP8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 TMEM200CA6NKL6 621 aa8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 KIAA1324LA8MWY0 1029 aaPredicted RBP8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 RTN2O75298 545 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms