RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 UBXN11Q5T124 520 aa15.39■□□□□ 0.05
NINJ1-204ENST00000489274 TAF2Q6P1X5 1199 aa15.39■□□□□ 0.05
NINJ1-204ENST00000489274 XYLT1Q86Y38 959 aa15.39■□□□□ 0.05
NINJ1-204ENST00000489274 CCDC50Q8IVM0 306 aa15.39■□□□□ 0.05
NINJ1-204ENST00000489274 C1orf54Q8WWF1 131 aa15.39■□□□□ 0.05
NINJ1-204ENST00000489274 PKNOX2Q96KN3 472 aa15.39■□□□□ 0.05
NINJ1-204ENST00000489274 DDX56Q9NY93 547 aaKnown RBP15.39■□□□□ 0.05
NINJ1-204ENST00000489274 UBQLN1Q9UMX0 589 aaKnown RBP15.39■□□□□ 0.05
NINJ1-204ENST00000489274 GOLGA6CA6NDK9 693 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 H0YGN5 161 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 CD4P01730 458 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 GOLGA6DP0CG33 693 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 KCNE1P15382 129 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 ATF7P17544 494 aaPredicted RBP15.38■□□□□ 0.05
NINJ1-204ENST00000489274 PTPN7P35236 360 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 RFC1P35251 1148 aaPredicted RBP15.38■□□□□ 0.05
NINJ1-204ENST00000489274 DHX9Q08211 1270 aaKnown RBP15.38■□□□□ 0.05
NINJ1-204ENST00000489274 NFX1Q12986 1120 aaKnown RBP15.38■□□□□ 0.05
NINJ1-204ENST00000489274 ATL2Q8NHH9 583 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 GRK7Q8WTQ7 553 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 MCRS1Q96EZ8 462 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 NXF3Q9H4D5 531 aaKnown RBP15.38■□□□□ 0.05
NINJ1-204ENST00000489274 CHST7Q9NS84 486 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 GOLGA6AQ9NYA3 693 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 PIN4Q9Y237 131 aaKnown RBP15.38■□□□□ 0.05
NINJ1-204ENST00000489274 PLAAQ9Y263 795 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 HES2Q9Y543 173 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 NFS1Q9Y697 457 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 M0QYV0 167 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 ERBB2P04626 1255 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 CYBAP13498 195 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 PLTPP55058 493 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 FCGRTP55899 365 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 NKX3-2P78367 333 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 PDCLQ13371 301 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 MFSD14CQ5VZR4 134 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 C9orf57Q5W0N0 161 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 POLNQ7Z5Q5 900 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 UNC93AQ86WB7 457 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 ART4Q93070 314 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 ARL8AQ96BM9 186 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 SLITRK1Q96PX8 696 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 MTG1Q9BT17 334 aaPredicted RBP15.38■□□□□ 0.05
NINJ1-204ENST00000489274 MIS12Q9H081 205 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 SYNCQ9H7C4 482 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 TUBGCP4Q9UGJ1 667 aa15.38■□□□□ 0.05
NINJ1-204ENST00000489274 CITO14578 2027 aa15.37■□□□□ 0.05
NINJ1-204ENST00000489274 GOLGA8SH3BPF8 625 aa15.37■□□□□ 0.05
NINJ1-204ENST00000489274 PIRO00625 290 aa15.37■□□□□ 0.05
NINJ1-204ENST00000489274 XPOTO43592 962 aaKnown RBP15.37■□□□□ 0.05
NINJ1-204ENST00000489274 ACAP1Q15027 740 aa15.37■□□□□ 0.05
NINJ1-204ENST00000489274 LLGL1Q15334 1064 aa15.37■□□□□ 0.05
NINJ1-204ENST00000489274 KCTD19Q17RG1 926 aaPredicted RBP15.37■□□□□ 0.05
NINJ1-204ENST00000489274 TTMPQ5BVD1 217 aa15.37■□□□□ 0.05
NINJ1-204ENST00000489274 ZNF771Q7L3S4 317 aaPredicted RBP15.37■□□□□ 0.05
NINJ1-204ENST00000489274 FAM76AQ8TAV0 307 aa15.37■□□□□ 0.05
NINJ1-204ENST00000489274 FBXO25Q8TCJ0 367 aa15.37■□□□□ 0.05
NINJ1-204ENST00000489274 C18orf25Q96B23 403 aaPredicted RBP15.37■□□□□ 0.05
NINJ1-204ENST00000489274 RNF25Q96BH1 459 aaPredicted RBP15.37■□□□□ 0.05
NINJ1-204ENST00000489274 HEMGNQ9BXL5 484 aa15.37■□□□□ 0.05
NINJ1-204ENST00000489274 UPF3AQ9H1J1 476 aaKnown RBP15.37■□□□□ 0.05
NINJ1-204ENST00000489274 WHRNQ9P202 907 aa15.37■□□□□ 0.05
NINJ1-204ENST00000489274 TJP2Q9UDY2 1190 aa15.37■□□□□ 0.05
NINJ1-204ENST00000489274 SNX9Q9Y5X1 595 aa15.37■□□□□ 0.05
NINJ1-204ENST00000489274 SMIM28A0A1B0GU29 152 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 PPEF2O14830 753 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 KRT14P02533 472 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 C6orf222P0C671 652 aaPredicted RBP15.36■□□□□ 0.05
NINJ1-204ENST00000489274 TCF4P15884 667 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 CYP3A5P20815 502 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 AKAP5P24588 427 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 PSMA2P25787 234 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 PTK6Q13882 451 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 PPP1R7Q15435 360 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 ATP13A4Q4VNC1 1196 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 ANKS1BQ7Z6G8 1248 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 JOSD2Q8TAC2 188 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 HHIPL1Q96JK4 782 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 MRPL45Q9BRJ2 306 aaKnown RBP15.36■□□□□ 0.05
NINJ1-204ENST00000489274 MTRF1LQ9UGC7 380 aaKnown RBP15.36■□□□□ 0.05
NINJ1-204ENST00000489274 TSPAN16Q9UKR8 245 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 R3HDM2Q9Y2K5 976 aaKnown RBP15.36■□□□□ 0.05
NINJ1-204ENST00000489274 PTPN22Q9Y2R2 807 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 RALGAPA2Q2PPJ7 1873 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 MYADML2A6NDP7 307 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 TJP3O95049 919 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 GAS8O95995 478 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 KRT1P04264 644 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 SNX1Q13596 522 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 GNASQ5JWF2 1037 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 SPOCD1Q6ZMY3 1216 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 UBA3Q8TBC4 463 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 IPO4Q8TEX9 1081 aaKnown RBP15.36■□□□□ 0.05
NINJ1-204ENST00000489274 UBLCP1Q8WVY7 318 aaPredicted RBP15.36■□□□□ 0.05
NINJ1-204ENST00000489274 ATG4AQ8WYN0 398 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 NEU2Q9Y3R4 380 aa15.36■□□□□ 0.05
NINJ1-204ENST00000489274 PFKMP08237 780 aa15.35■□□□□ 0.05
NINJ1-204ENST00000489274 KRT7P08729 469 aa15.35■□□□□ 0.05
NINJ1-204ENST00000489274 SETSIPP0DME0 302 aa15.35■□□□□ 0.05
NINJ1-204ENST00000489274 ITIH2P19823 946 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms