RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, human

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNB1-215	ENST00000488914	TGFB3	P10600	412 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	DSC2	Q02487	901 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	SNAPC2	Q13487	334 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	SIM2	Q14190	667 aa	Predicted RBP	5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	RAB39A	Q14964	217 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	ALDH1L2	Q3SY69	923 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	KHDC1	Q4VXA5	237 aa	Known RBP	5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	C1QTNF12	Q5T7M4	302 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	TAPT1	Q6NXT6	567 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	SLC30A10	Q6XR72	485 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	VPS37A	Q8NEZ2	397 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	TIMP4	Q99727	224 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	SEZ6L	Q9BYH1	1024 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	POLG2	Q9UHN1	485 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	ACAD8	Q9UKU7	415 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	ODF2L	Q9ULJ1	636 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	ISY1	Q9ULR0	285 aa	Known RBP	5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	ENTPD2	Q9Y5L3	495 aa		5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	POLR2A	P24928	1970 aa	Known RBP	5.73	□□□□□ -1.49
CTNNB1-215	ENST00000488914	PRSS29P	A6NIE9	313 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	TSPAN6	O43657	245 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	MAL	P21145	153 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	LPO	P22079	712 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	ITPKB	P27987	946 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	TDO2	P48775	406 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	GUCY2F	P51841	1108 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	ITK	Q08881	620 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	PTPRR	Q15256	657 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	PREPL	Q4J6C6	727 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	INO80D	Q53TQ3	878 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	PAPD7	Q5XG87	772 aa	Known RBP	5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	CCDC70	Q6NSX1	233 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	AMIGO2	Q86SJ2	522 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	NSUN6	Q8TEA1	469 aa	Known RBP	5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	DDB2	Q92466	427 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	SNX19	Q92543	992 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	ERP27	Q96DN0	273 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	SMOC2	Q9H3U7	446 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	CHST12	Q9NRB3	414 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	CALCOCO1	Q9P1Z2	691 aa		5.72	□□□□□ -1.49
CTNNB1-215	ENST00000488914	DYTN	A2CJ06	578 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	WDR27	A2RRH5	827 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	DNAJC9-AS1	A6NH13	148 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	NT5C1B-RDH14	C9J2C7	533 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	MTA2	O94776	668 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	RHO	P08100	348 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	MYL3	P08590	195 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	CDK4	P11802	303 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	ANP32A	P39687	249 aa	Known RBP	5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	ABCG1	P45844	678 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	EXOSC10	Q01780	885 aa	Known RBP	5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	NFE2	Q16621	373 aa	Predicted RBP	5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	LONRF1	Q17RB8	773 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	UAP1L1	Q3KQV9	507 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	CCDC93	Q567U6	631 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	C10orf62	Q5T681	223 aa	Predicted RBP	5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	MICALCL	Q6ZW33	695 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	RAVER1	Q8IY67	606 aa	Known RBP	5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	MYRIP	Q8NFW9	859 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	DPF1	Q92782	380 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	GOLGA1	Q92805	767 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	MTMR8	Q96EF0	704 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	PGBD1	Q96JS3	809 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	TRIB1	Q96RU8	372 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	RABGAP1	Q9Y3P9	1069 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	ADGRA2	Q96PE1	1338 aa		5.71	□□□□□ -1.5
CTNNB1-215	ENST00000488914	MANSC4	A6NHS7	340 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	RPN1	P04843	607 aa	Known RBP	5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	PHKA1	P46020	1223 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	NPTX2	P47972	431 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	CLK1	P49759	484 aa	Known RBP	5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	KRTAP10-11	P60412	298 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	POU6F2	P78424	691 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	SRSF4	Q08170	494 aa	Known RBP	5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	ZKSCAN8	Q15776	578 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	GRAMD1B	Q3KR37	738 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	GRASP	Q7Z6J2	395 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	ANKRD13B	Q86YJ7	626 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	HSCB	Q8IWL3	235 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	LMNTD2	Q8IXW0	634 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	POC1B	Q8TC44	478 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	ANKS1A	Q92625	1134 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	CCDC47	Q96A33	483 aa	Known RBP	5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	SARAF	Q96BY9	339 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	CXorf56	Q9H5V9	222 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	CLIC5	Q9NZA1	410 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	FBXO2	Q9UK22	296 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	AGAP1	Q9UPQ3	857 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	NEU2	Q9Y3R4	380 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	TNKS	O95271	1327 aa		5.7	□□□□□ -1.5
CTNNB1-215	ENST00000488914	SHTN1	A0MZ66	631 aa		5.69	□□□□□ -1.5
CTNNB1-215	ENST00000488914	POLRMT	O00411	1230 aa	Known RBP	5.69	□□□□□ -1.5
CTNNB1-215	ENST00000488914	WT1	P19544	449 aa	Predicted RBP	5.69	□□□□□ -1.5
CTNNB1-215	ENST00000488914	GPD1	P21695	349 aa		5.69	□□□□□ -1.5
CTNNB1-215	ENST00000488914	RRM1	P23921	792 aa		5.69	□□□□□ -1.5
CTNNB1-215	ENST00000488914	EPHB1	P54762	984 aa		5.69	□□□□□ -1.5
CTNNB1-215	ENST00000488914	PIGF	Q07326	219 aa		5.69	□□□□□ -1.5
CTNNB1-215	ENST00000488914	HLX	Q14774	488 aa	Predicted RBP	5.69	□□□□□ -1.5
CTNNB1-215	ENST00000488914	NBPF8	Q3BBV2	869 aa		5.69	□□□□□ -1.5

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