RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 ANKS4BQ8N8V4 417 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 C12orf50Q8NA57 414 aaPredicted RBP19.4■□□□□ 0.7
COL16A1-215ENST00000488897 CCDC197Q8NCU1 140 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 IPO4Q8TEX9 1081 aaKnown RBP19.4■□□□□ 0.7
COL16A1-215ENST00000488897 ZNF317Q96PQ6 595 aaPredicted RBP19.4■□□□□ 0.7
COL16A1-215ENST00000488897 PLVAPQ9BX97 442 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 HAPLN2Q9GZV7 340 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 SLC40A1Q9NP59 571 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 TBX21Q9UL17 535 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 EXOC7Q9UPT5 735 aa19.4■□□□□ 0.7
COL16A1-215ENST00000488897 ASAP2O43150 1006 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 EIF4BP23588 611 aaKnown RBP19.39■□□□□ 0.69
COL16A1-215ENST00000488897 NCKAP1LP55160 1127 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 OSTNP61366 133 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 FMO1Q01740 532 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 VWCEQ96DN2 955 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 KREMEN1Q96MU8 473 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 YY1AP1Q9H869 796 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 ARHGAP28Q9P2N2 729 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 HES2Q9Y543 173 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 RIPK2O43353 540 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 PTPN11Q06124 597 aaPredicted RBP19.39■□□□□ 0.69
COL16A1-215ENST00000488897 EEF1DP3Q658K8 133 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 KRT39Q6A163 491 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 SLC47A2Q86VL8 602 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 ATXN2LQ8WWM7 1075 aaKnown RBP19.39■□□□□ 0.69
COL16A1-215ENST00000488897 CCT6BQ92526 530 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 ZNF653Q96CK0 615 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 JPH2Q9BR39 696 aaPredicted RBP19.39■□□□□ 0.69
COL16A1-215ENST00000488897 ROPN1BQ9BZX4 212 aaPredicted RBP19.39■□□□□ 0.69
COL16A1-215ENST00000488897 CXCL16Q9H2A7 254 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 ADAM7Q9H2U9 754 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 ROPN1Q9HAT0 212 aaPredicted RBP19.39■□□□□ 0.69
COL16A1-215ENST00000488897 INTS9Q9NV88 658 aaKnown RBP19.39■□□□□ 0.69
COL16A1-215ENST00000488897 ANKFY1Q9P2R3 1169 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 TBX20Q9UMR3 447 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 ST3GAL5Q9UNP4 418 aa19.39■□□□□ 0.69
COL16A1-215ENST00000488897 RASGRF2O14827 1237 aa19.38■□□□□ 0.69
COL16A1-215ENST00000488897 RARAP10276 462 aa19.38■□□□□ 0.69
COL16A1-215ENST00000488897 DARSP14868 501 aaKnown RBP19.38■□□□□ 0.69
COL16A1-215ENST00000488897 SLC39A4Q6P5W5 647 aa19.38■□□□□ 0.69
COL16A1-215ENST00000488897 CEP120Q8N960 986 aa19.38■□□□□ 0.69
COL16A1-215ENST00000488897 BADQ92934 168 aa19.38■□□□□ 0.69
COL16A1-215ENST00000488897 CCDC134Q9H6E4 229 aa19.38■□□□□ 0.69
COL16A1-215ENST00000488897 LRRC19Q9H756 370 aa19.38■□□□□ 0.69
COL16A1-215ENST00000488897 CHORDC1Q9UHD1 332 aaPredicted RBP19.38■□□□□ 0.69
COL16A1-215ENST00000488897 PADI3Q9ULW8 664 aa19.38■□□□□ 0.69
COL16A1-215ENST00000488897 TRPV2Q9Y5S1 764 aa19.38■□□□□ 0.69
COL16A1-215ENST00000488897 TLR3O15455 904 aaKnown RBP19.37■□□□□ 0.69
COL16A1-215ENST00000488897 ATMINO43313 823 aaPredicted RBP19.37■□□□□ 0.69
COL16A1-215ENST00000488897 MGEA5O60502 916 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 ECEL1O95672 775 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 CYP11B1P15538 503 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 RAG1P15918 1043 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 SCTRP47872 440 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 IFI35P80217 286 aaPredicted RBP19.37■□□□□ 0.69
COL16A1-215ENST00000488897 CDR2Q01850 454 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 CALCOCO2Q13137 446 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 SIX1Q15475 284 aaPredicted RBP19.37■□□□□ 0.69
COL16A1-215ENST00000488897 AMHR2Q16671 573 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 TMEM132AQ24JP5 1023 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 FBXO47Q5MNV8 452 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 ZBTB41Q5SVQ8 909 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 TRMT10CQ7L0Y3 403 aaKnown RBP19.37■□□□□ 0.69
COL16A1-215ENST00000488897 TAOK1Q7L7X3 1001 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 NTPCRQ9BSD7 190 aaKnown RBP19.37■□□□□ 0.69
COL16A1-215ENST00000488897 COQ4Q9Y3A0 265 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 GOLGA8IPA6NC78 632 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 SMIM23A6NLE4 172 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 GOLGA8JA6NMD2 632 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 M0QZ92 97 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 CHUKO15111 745 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 PRKCBP05771 671 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 ADRB2P07550 413 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 ARF4P18085 180 aaPredicted RBP19.37■□□□□ 0.69
COL16A1-215ENST00000488897 PDE6CP51160 858 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 TNFAIP8L3Q5GJ75 292 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 CATSPER4Q7RTX7 472 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 CCDC91Q7Z6B0 441 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 RSPH3Q86UC2 560 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 DBF4BQ8NFT6 615 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 BICD1Q96G01 975 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 TOX2Q96NM4 488 aa19.37■□□□□ 0.69
COL16A1-215ENST00000488897 TCRBV7S2A1N4TA0A589 114 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 MEIS3P2A8K0S8 358 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 SELPP16109 830 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 CRYBB1P53674 252 aaPredicted RBP19.36■□□□□ 0.69
COL16A1-215ENST00000488897 ITIH4Q14624 930 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 SNRNP35Q16560 246 aaKnown RBP19.36■□□□□ 0.69
COL16A1-215ENST00000488897 MFSD5Q6N075 450 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 PIGWQ7Z7B1 504 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 TMEM192Q8IY95 271 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 SLCO2A1Q92959 643 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 EIF2AQ9BY44 585 aaKnown RBP19.36■□□□□ 0.69
COL16A1-215ENST00000488897 GCOM2Q9BZD3 368 aaPredicted RBP19.36■□□□□ 0.69
COL16A1-215ENST00000488897 CCDC113Q9H0I3 377 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 TMEM8AQ9HCN3 771 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 MROH7Q68CQ1 1323 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 CCT8L1PA6NM43 557 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 HOXA11P31270 313 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms