RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TOP6BLQ8N6T0 577 aa20.64■□□□□ 0.9
CCM2-216ENST00000488727 MRPL43Q8N983 215 aaKnown RBP20.64■□□□□ 0.9
CCM2-216ENST00000488727 APPL2Q8NEU8 664 aa20.64■□□□□ 0.9
CCM2-216ENST00000488727 TATDN2Q93075 761 aa20.64■□□□□ 0.9
CCM2-216ENST00000488727 MMS19Q96T76 1030 aa20.64■□□□□ 0.9
CCM2-216ENST00000488727 CDX2Q99626 313 aaPredicted RBP20.64■□□□□ 0.9
CCM2-216ENST00000488727 NGRNQ9NPE2 291 aaKnown RBP20.64■□□□□ 0.9
CCM2-216ENST00000488727 MTMR10Q9NXD2 777 aa20.64■□□□□ 0.9
CCM2-216ENST00000488727 GCNT4Q9P109 453 aa20.64■□□□□ 0.9
CCM2-216ENST00000488727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.64■□□□□ 0.89
CCM2-216ENST00000488727 SSU72P8A0A1W2PR75 194 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 C2orf71A6NGG8 1288 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 LRRC53A6NM62 1247 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 TNNC1P63316 161 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 CETN1Q12798 172 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 MAPK8IP2Q13387 824 aaPredicted RBP20.64■□□□□ 0.89
CCM2-216ENST00000488727 PSMD5Q16401 504 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 PTPROQ16827 1216 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 SCARA5Q6ZMJ2 495 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 ADGRD2Q7Z7M1 963 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 KBTBD7Q8WVZ9 684 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 MYLIPQ8WY64 445 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 INTS2Q9H0H0 1204 aaKnown RBP20.64■□□□□ 0.89
CCM2-216ENST00000488727 SDCBP2Q9H190 292 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 SMYD3Q9H7B4 428 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 MTCH2Q9Y6C9 303 aa20.64■□□□□ 0.89
CCM2-216ENST00000488727 GTPBP10A4D1E9 387 aaKnown RBP20.63■□□□□ 0.89
CCM2-216ENST00000488727 OAZ2O95190 189 aa20.63■□□□□ 0.89
CCM2-216ENST00000488727 RPL17P18621 184 aaKnown RBP20.63■□□□□ 0.89
CCM2-216ENST00000488727 POU3F3P20264 500 aaPredicted RBP20.63■□□□□ 0.89
CCM2-216ENST00000488727 CA8P35219 290 aa20.63■□□□□ 0.89
CCM2-216ENST00000488727 YWHAHQ04917 246 aaPredicted RBP20.63■□□□□ 0.89
CCM2-216ENST00000488727 SPA17Q15506 151 aa20.63■□□□□ 0.89
CCM2-216ENST00000488727 OVOS1Q6IE37 1185 aa20.63■□□□□ 0.89
CCM2-216ENST00000488727 PDE12Q6L8Q7 609 aaKnown RBP20.63■□□□□ 0.89
CCM2-216ENST00000488727 RSPO2Q6UXX9 243 aaPredicted RBP20.63■□□□□ 0.89
CCM2-216ENST00000488727 ANKS3Q6ZW76 656 aa20.63■□□□□ 0.89
CCM2-216ENST00000488727 DPH6Q7L8W6 267 aa20.63■□□□□ 0.89
CCM2-216ENST00000488727 GPR65Q8IYL9 337 aa20.63■□□□□ 0.89
CCM2-216ENST00000488727 MRPL45Q9BRJ2 306 aaKnown RBP20.63■□□□□ 0.89
CCM2-216ENST00000488727 NIF3L1Q9GZT8 377 aa20.63■□□□□ 0.89
CCM2-216ENST00000488727 LMCD1Q9NZU5 365 aa20.63■□□□□ 0.89
CCM2-216ENST00000488727 MYO6Q9UM54 1294 aa20.63■□□□□ 0.89
CCM2-216ENST00000488727 EYSQ5T1H1 3165 aa20.63■□□□□ 0.89
CCM2-216ENST00000488727 ZNF263O14978 683 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 TBC1D4O60343 1298 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 ZRANB2O95218 330 aaKnown RBP eCLIP20.62■□□□□ 0.89
CCM2-216ENST00000488727 CNPP09543 421 aaKnown RBP20.62■□□□□ 0.89
CCM2-216ENST00000488727 SLC9A1P19634 815 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 RAP1GAPP47736 663 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 KIF11P52732 1056 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 CDH8P55286 799 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 APBA1Q02410 837 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 EXOC3L4Q17RC7 722 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 WDR44Q5JSH3 913 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 PAPD7Q5XG87 772 aaKnown RBP20.62■□□□□ 0.89
CCM2-216ENST00000488727 GBP6Q6ZN66 633 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 RRAGAQ7L523 313 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 OSTM1Q86WC4 334 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 ADGRF2Q8IZF7 708 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 GAS2L1Q99501 681 aaPredicted RBP20.62■□□□□ 0.89
CCM2-216ENST00000488727 RTP3Q9BQQ7 232 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 BCO2Q9BYV7 579 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 RXFP1Q9HBX9 757 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 MTRRQ9UBK8 725 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 DSEQ9UL01 958 aa20.62■□□□□ 0.89
CCM2-216ENST00000488727 ARHGEF37A1IGU5 675 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 RCCD1A6NED2 376 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 ADAM12O43184 909 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 ATP8B1O43520 1251 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 HCRTO43612 131 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 NOL4O94818 638 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 IGFBP4P22692 258 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 PON1P27169 355 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 KIF5AQ12840 1032 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 BMS1Q14692 1282 aaKnown RBP20.61■□□□□ 0.89
CCM2-216ENST00000488727 TMCO3Q6UWJ1 677 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 CACNA2D4Q7Z3S7 1137 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 TMEM86AQ8N2M4 240 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 CLSTN3Q9BQT9 956 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 LSM14BQ9BX40 385 aaKnown RBP20.61■□□□□ 0.89
CCM2-216ENST00000488727 LACRTQ9GZZ8 138 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 NME7Q9Y5B8 376 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 PLXNA3P51805 1871 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 SPDYE4A6NLX3 237 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 GABRDO14764 452 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 TEX28O15482 410 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 TACC1O75410 805 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 PLEKP08567 350 aaPredicted RBP20.61■□□□□ 0.89
CCM2-216ENST00000488727 WEE2P0C1S8 567 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 EIF4A3P38919 411 aaKnown RBP20.61■□□□□ 0.89
CCM2-216ENST00000488727 CBX1P83916 185 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 ASTE1Q2TB18 679 aaPredicted RBP20.61■□□□□ 0.89
CCM2-216ENST00000488727 CTXN3Q4LDR2 81 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 ZNF280DQ6N043 979 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 GLYCTKQ8IVS8 523 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 ARHGEF19Q8IW93 802 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 TXLNBQ8N3L3 684 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 MSANTD4Q8NCY6 345 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 NT5C1BQ96P26 610 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms