RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 IGFL4Q6B9Z1 124 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 SP5Q6BEB4 398 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 TMEM108Q6UXF1 575 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 RHOUQ7L0Q8 258 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 GPR149Q86SP6 731 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 GGNQ86UU5 652 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 FAM9AQ8IZU1 332 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 ASB10Q8WXI3 467 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 MAML1Q92585 1016 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 TRIM43Q96BQ3 446 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 NMD3Q96D46 503 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 TBCBQ99426 244 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 STK31Q9BXU1 1019 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 WDR11Q9BZH6 1224 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 SERHL2Q9H4I8 314 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 SMURF2Q9HAU4 748 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 CASS4Q9NQ75 786 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 A1CFQ9NQ94 594 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 DKK2Q9UBU2 259 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 SHOC2Q9UQ13 582 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 MYO15BQ96JP2 1530 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 PYCARD-AS1I3L0S3 204 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 FOXN3O00409 490 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 DCLK1O15075 740 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 NARSO43776 548 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 IFIT2P09913 472 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 CYP2C9P11712 490 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 C6P13671 934 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 TACR2P21452 398 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 CD6P30203 668 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 PIK3CBP42338 1070 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 ZNF134P52741 427 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 LOXL3P58215 753 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 ABHD18Q0P651 414 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 LONRF1Q17RB8 773 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 RBM20Q5T481 1227 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 DCAF12L1Q5VU92 463 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 CRIP3Q6Q6R5 217 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 TMPRSS9Q7Z410 1059 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 B3GALNT2Q8NCR0 500 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 SSH3Q8TE77 659 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 TNIP3Q96KP6 325 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 STRBPQ96SI9 672 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 NAA15Q9BXJ9 866 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 TPSD1Q9BZJ3 242 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 UNKQ9C0B0 810 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 ZNF700Q9H0M5 742 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 CYP4F11Q9HBI6 524 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 COL20A1Q9P218 1284 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 ITGB1BP2Q9UKP3 347 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 HDAC9Q9UKV0 1011 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 DMTF1Q9Y222 760 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 HS3ST4Q9Y661 456 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 HS3ST3A1Q9Y663 406 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 SPATA31A3Q5VYP0 1347 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 CLSPNQ9HAW4 1339 aa4.71□□□□□ -1.66
ECHDC1-217ENST00000488087 MBD3L4A6NDZ8 208 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 MBD3L3A6NE82 208 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 POM121BA6NF01 834 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 KLRC1P26715 233 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 PRIM2P49643 509 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 AK2P54819 239 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 WNT3P56703 355 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 UBE4AQ14139 1066 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 BRD3Q15059 726 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 MGAT5BQ3V5L5 792 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 PLA1AQ53H76 456 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 SYCP2LQ5T4T6 812 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 ABHD17BQ5VST6 288 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 MICU3Q86XE3 530 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 LIX1LQ8IVB5 337 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 CCDC33Q8N5R6 958 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 TOR1AIP2Q8NFQ8 470 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 OR56A3Q8NH54 315 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 SLC30A5Q8TAD4 765 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 NEU4Q8WWR8 484 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 SPSB4Q96A44 273 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 Q96MF0 132 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 PPP1R9BQ96SB3 815 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 ANP32EQ9BTT0 268 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 PHTF1Q9UMS5 762 aa4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.7□□□□□ -1.66
ECHDC1-217ENST00000488087 PIPSLA2A3N6 862 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 F8W8V4 182 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 FZD7O75084 574 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 IL18RAPO95256 599 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 PARP1P09874 1014 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 EGR2P11161 476 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 PPP3CBP16298 524 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 LRPAP1P30533 357 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 STT3AP46977 705 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 DAG1Q14118 895 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 SF3B3Q15393 1217 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 ARHGAP40Q5TG30 622 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 VPS53Q5VIR6 699 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 SFRP4Q6FHJ7 346 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 USP51Q70EK9 711 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 SLC44A3Q8N4M1 653 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms