RNA–Protein interactions for RNA: ENST00000487998.5

RPP30-209, Transcript of ribonuclease P/MRP subunit p30, human

TSL 5

Gene RPP30, Length 1,466 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP30-209	ENST00000487998	PTPN1	P18031	435 aa	Known RBP	13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	CLCN4	P51793	760 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	ZNF75D	P51815	510 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	ZNF132	P52740	706 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	JAM2	P57087	298 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	ORC1	Q13415	861 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	NFE2	Q16621	373 aa	Predicted RBP	13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	DUSP6	Q16828	381 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	SLC39A12	Q504Y0	691 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	TPGS2	Q68CL5	300 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	SPECC1L	Q69YQ0	1117 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	ACOT1	Q86TX2	421 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	RBM23	Q86U06	439 aa	Known RBP	13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	LRRTM3	Q86VH5	581 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	PALB2	Q86YC2	1186 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	VSTM4	Q8IW00	320 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	SLC4A11	Q8NBS3	891 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	ZNF461	Q8TAF7	563 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	MYCBPAP	Q8TBZ2	947 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	C2orf15	Q8WU43	125 aa	Known RBP	13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	SPAG5	Q96R06	1193 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	TTYH3	Q9C0H2	523 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	ELOVL4	Q9GZR5	314 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	GRPEL1	Q9HAV7	217 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	CRTAC1	Q9NQ79	661 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998	GTF3C4	Q9UKN8	822 aa		13.89	□□□□□ -0.19
RPP30-209	ENST00000487998		F8VZ95	297 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	RNF225	M0QZC1	329 aa	Predicted RBP	13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	FOXN3	O00409	490 aa	Predicted RBP	13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	PER2	O15055	1255 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	TGM5	O43548	720 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	GLUD1	P00367	558 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	PAEP	P09466	180 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	USP8	P40818	1118 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	NRIP1	P48552	1158 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	TRIM14	Q14142	442 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	TCEAL5	Q5H9L2	206 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	MDH1B	Q5I0G3	518 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	RNF19B	Q6ZMZ0	732 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	C4orf50	Q6ZRC1	276 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	FAM71A	Q8IYT1	594 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	MYLIP	Q8WY64	445 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	PCED1B	Q96HM7	432 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	HEXIM2	Q96MH2	286 aa	Known RBP	13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	GUCD1	Q96NT3	240 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	AFF4	Q9UHB7	1163 aa	Known RBP	13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	KIAA1257	Q9ULG3	409 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	MAFF	Q9ULX9	164 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998	MYO6	Q9UM54	1294 aa		13.88	□□□□□ -0.19
RPP30-209	ENST00000487998		A0A1W2PQJ5	194 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	MTMR11	A4FU01	709 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	ATF2	P15336	505 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	STAT1	P42224	750 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	LILRA6	Q6PI73	481 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	FMNL3	Q8IVF7	1028 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	SPPL2B	Q8TCT7	592 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	SLC22A17	Q8WUG5	538 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	MYLPF	Q96A32	169 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	PGLYRP2	Q96PD5	576 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	TMLHE	Q9NVH6	421 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	HSFX1	Q9UBD0	423 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	DPP7	Q9UHL4	492 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	FBXW11	Q9UKB1	542 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	PCDHB5	Q9Y5E4	795 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	HCFC2	Q9Y5Z7	792 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	ATP8B3	O60423	1300 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	GYPC	P04921	128 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	PNMA6A	P0CW24	399 aa	Predicted RBP	13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	VDR	P11473	427 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	FOSL2	P15408	326 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	ELF1	P32519	619 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	SOX5	P35711	763 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	CYP27A1	Q02318	531 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	PTK2	Q05397	1052 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	ADCY1	Q08828	1119 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	HYAL1	Q12794	435 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	CCDC142	Q17RM4	750 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	CFAP221	Q4G0U5	840 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	C12orf29	Q8N999	325 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	ZNF397	Q8NF99	534 aa	Predicted RBP	13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	HDAC7	Q8WUI4	952 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	BAP1	Q92560	729 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	CYFIP2	Q96F07	1278 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	LPIN3	Q9BQK8	851 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	PLEKHA4	Q9H4M7	779 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	ABCB6	Q9NP58	842 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	ABI2	Q9NYB9	513 aa	Predicted RBP	13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	CAPN11	Q9UMQ6	739 aa		13.87	□□□□□ -0.19
RPP30-209	ENST00000487998	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.86	□□□□□ -0.19
RPP30-209	ENST00000487998	CYP26A1	O43174	497 aa		13.86	□□□□□ -0.19
RPP30-209	ENST00000487998	VNN2	O95498	520 aa		13.86	□□□□□ -0.19
RPP30-209	ENST00000487998	ADCY5	O95622	1261 aa		13.86	□□□□□ -0.19
RPP30-209	ENST00000487998	TPM1	P09493	284 aa		13.86	□□□□□ -0.19
RPP30-209	ENST00000487998	CD19	P15391	556 aa		13.86	□□□□□ -0.19
RPP30-209	ENST00000487998	EPCAM	P16422	314 aa		13.86	□□□□□ -0.19
RPP30-209	ENST00000487998	GNA15	P30679	374 aa		13.86	□□□□□ -0.19
RPP30-209	ENST00000487998	CLCN1	P35523	988 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms