RNA–Protein interactions for RNA: ENST00000487452.1

PPP1R35-204, Transcript of protein phosphatase 1 regulatory subunit 35, human

TSL 2

Gene PPP1R35, Length 965 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R35-204	ENST00000487452	MAN2A1	Q16706	1144 aa		29.86	■■■□□ 2.37
PPP1R35-204	ENST00000487452	WDR6	Q9NNW5	1121 aa	Known RBP	29.86	■■■□□ 2.37
PPP1R35-204	ENST00000487452	ABI2	Q9NYB9	513 aa	Predicted RBP	29.86	■■■□□ 2.37
PPP1R35-204	ENST00000487452	YIPF1	Q9Y548	306 aa		29.86	■■■□□ 2.37
PPP1R35-204	ENST00000487452	MYBPHL	A2RUH7	354 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	KCNJ18	B7U540	433 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	WEE2	P0C1S8	567 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	RAP1GAP	P47736	663 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	EPHB3	P54753	998 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	INCA1	Q0VD86	236 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	TWF1	Q12792	350 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	KCNJ12	Q14500	433 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	CFAP221	Q4G0U5	840 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	SPATA2L	Q8IUW3	424 aa	Predicted RBP	29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	ADHFE1	Q8IWW8	467 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	MYCBPAP	Q8TBZ2	947 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	NECAB3	Q96P71	396 aa	Predicted RBP	29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	BPIFA3	Q9BQP9	254 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	SDCBP2	Q9H190	292 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	SAMSN1	Q9NSI8	373 aa	Known RBP	29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	TMLHE	Q9NVH6	421 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	SLC27A5	Q9Y2P5	690 aa		29.85	■■■□□ 2.37
PPP1R35-204	ENST00000487452	HCRT	O43612	131 aa		29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	LRRN2	O75325	713 aa		29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	PTPN1	P18031	435 aa	Known RBP	29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	ANO6	Q4KMQ2	910 aa		29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	TCP11X2	Q5H9J9	407 aa		29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	B3GALNT2	Q8NCR0	500 aa		29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	EHBP1	Q8NDI1	1231 aa		29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	NT5C1B	Q96P26	610 aa		29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	UHRF1	Q96T88	793 aa	Predicted RBP	29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	CRISPLD1	Q9H336	500 aa		29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	POMK	Q9H5K3	350 aa		29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	CRTAC1	Q9NQ79	661 aa		29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	ASB3	Q9Y575	518 aa		29.84	■■■□□ 2.37
PPP1R35-204	ENST00000487452	TTC28	Q96AY4	2481 aa		29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	SYCE3	A1L190	88 aa		29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	ATP2C2	O75185	946 aa		29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	HAPLN1	P10915	354 aa	Predicted RBP	29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	TBXAS1	P24557	533 aa	Predicted RBP	29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	PSMC1	P62191	440 aa	Known RBP	29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	YWHAE	P62258	255 aa	Known RBP	29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	NFKBIB	Q15653	356 aa		29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	MGAT5B	Q3V5L5	792 aa		29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	IQCE	Q6IPM2	695 aa		29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	ZNF512	Q96ME7	567 aa	Predicted RBP	29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	SEPT5	Q99719	369 aa	Predicted RBP	29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	TUBGCP2	Q9BSJ2	902 aa		29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	NR2E1	Q9Y466	385 aa		29.83	■■■□□ 2.37
PPP1R35-204	ENST00000487452	GTPBP10	A4D1E9	387 aa	Known RBP	29.82	■■■□□ 2.36
PPP1R35-204	ENST00000487452	PTPN2	P17706	415 aa		29.82	■■■□□ 2.36
PPP1R35-204	ENST00000487452	NDST1	P52848	882 aa		29.82	■■■□□ 2.36
PPP1R35-204	ENST00000487452	CUL2	Q13617	745 aa		29.82	■■■□□ 2.36
PPP1R35-204	ENST00000487452	CDKAL1	Q5VV42	579 aa		29.82	■■■□□ 2.36
PPP1R35-204	ENST00000487452	CRYBG2	Q8N1P7	616 aa		29.82	■■■□□ 2.36
PPP1R35-204	ENST00000487452	LMO3	Q8TAP4	145 aa		29.82	■■■□□ 2.36
PPP1R35-204	ENST00000487452	TATDN2	Q93075	761 aa		29.82	■■■□□ 2.36
PPP1R35-204	ENST00000487452	CDH22	Q9UJ99	828 aa		29.82	■■■□□ 2.36
PPP1R35-204	ENST00000487452	UST	Q9Y2C2	406 aa		29.82	■■■□□ 2.36
PPP1R35-204	ENST00000487452	NME7	Q9Y5B8	376 aa		29.82	■■■□□ 2.36
PPP1R35-204	ENST00000487452	CLUH	O75153	1309 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	MAGEA11	P43364	429 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	RPL10A	P62906	217 aa	Known RBP	29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	VWA3B	Q502W6	1294 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	MDH1B	Q5I0G3	518 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	VSTM1	Q6UX27	236 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	GBP6	Q6ZN66	633 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	GRASP	Q7Z6J2	395 aa	Predicted RBP	29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	ITIH5	Q86UX2	942 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	LEMD2	Q8NC56	503 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	ANKRD20A12P	Q8NF67	263 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	MYLPF	Q96A32	169 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	FUCA2	Q9BTY2	467 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	NT5C1A	Q9BXI3	368 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	AVEN	Q9NQS1	362 aa	Predicted RBP	29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	FANCL	Q9NW38	375 aa		29.81	■■■□□ 2.36
PPP1R35-204	ENST00000487452	SMTNL1	A8MU46	457 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	CILP	O75339	1184 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	CAVIN2	O95810	425 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	TPM2	P07951	284 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	ZP2	Q05996	745 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	VEPH1	Q14D04	833 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	HSP90AA4P	Q58FG1	418 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	TTC9B	Q8N6N2	239 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	PCED1B	Q96HM7	432 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	NDST4	Q9H3R1	872 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	DPEP3	Q9H4B8	488 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	CISH	Q9NSE2	258 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	GCNT4	Q9P109	453 aa		29.8	■■■□□ 2.36
PPP1R35-204	ENST00000487452	ATP8B3	O60423	1300 aa		29.79	■■■□□ 2.36
PPP1R35-204	ENST00000487452	CD58	P19256	250 aa		29.79	■■■□□ 2.36
PPP1R35-204	ENST00000487452	CYP27A1	Q02318	531 aa		29.79	■■■□□ 2.36
PPP1R35-204	ENST00000487452	LRMP	Q12912	555 aa		29.79	■■■□□ 2.36
PPP1R35-204	ENST00000487452	ZSCAN23	Q3MJ62	389 aa		29.79	■■■□□ 2.36
PPP1R35-204	ENST00000487452	PABPC1L	Q4VXU2	614 aa	Known RBP	29.79	■■■□□ 2.36
PPP1R35-204	ENST00000487452	OTOP3	Q7RTS5	596 aa		29.79	■■■□□ 2.36
PPP1R35-204	ENST00000487452	FEZF2	Q8TBJ5	459 aa		29.79	■■■□□ 2.36
PPP1R35-204	ENST00000487452	FAM81B	Q96LP2	452 aa		29.79	■■■□□ 2.36
PPP1R35-204	ENST00000487452	CEP295NL	Q96MC4	621 aa		29.79	■■■□□ 2.36
PPP1R35-204	ENST00000487452	INTS2	Q9H0H0	1204 aa	Known RBP	29.79	■■■□□ 2.36

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms