RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 LRRD1A4D1F6 860 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 ADCY3O60266 1144 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 TOM1L1O75674 476 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 GLRA2P23416 452 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 RPS12P25398 132 aaKnown RBP13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 TGFB2P61812 414 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 NAA25Q14CX7 972 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 MTERF2Q49AM1 385 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 CHSY1Q86X52 802 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 PASD1Q8IV76 773 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 TRIM42Q8IWZ5 723 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 REPS2Q8NFH8 660 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 CYTH2Q99418 400 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 TEX13BQ9BXU2 312 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 MRPL4Q9BYD3 311 aaKnown RBP13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 MIS12Q9H081 205 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 MYOZ2Q9NPC6 264 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 RABGEF1Q9UJ41 708 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 SUFUQ9UMX1 484 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 AGTPBP1Q9UPW5 1226 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 CHKBQ9Y259 395 aa13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.03□□□□□ -0.32
TMEM39B-208ENST00000487305 PARP14Q460N5 1801 aa13.02□□□□□ -0.32
TMEM39B-208ENST00000487305 IGKV6D-21A0A0A0MT36 114 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 LRRIQ4A6NIV6 560 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 DIAPH2O60879 1101 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 DNAJC6O75061 913 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 RXRBP28702 533 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 RPA3P35244 121 aaPredicted RBP13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 RPL7AP62424 266 aaKnown RBP13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 MTMR2Q13614 643 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 WDR72Q3MJ13 1102 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 ACCSLQ4AC99 568 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 TBC1D10BQ4KMP7 808 aaPredicted RBP13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 KAZNQ674X7 775 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 SPOPLQ6IQ16 392 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 FAM47EQ6ZV65 393 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 KIF2BQ8N4N8 673 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 NAT8LQ8N9F0 302 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 STK32AQ8WU08 396 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 RSAD2Q8WXG1 361 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 FAM167AQ96KS9 214 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 PWWP2AQ96N64 755 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 MCEEQ96PE7 176 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 TRIM55Q9BYV6 548 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 CYP39A1Q9NYL5 469 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 POLIQ9UNA4 740 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 MTO1Q9Y2Z2 717 aaKnown RBP13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 L3MBTL1Q9Y468 752 aa13.02□□□□□ -0.33
TMEM39B-208ENST00000487305 CCDC22O60826 627 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 RGS20O76081 388 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 KRT10P13645 584 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 KRT4P19013 534 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 GCKP35557 465 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 GJC1P36383 396 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 ZNF280AP59817 542 aaPredicted RBP13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 CDK18Q07002 472 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 ZRSR2Q15696 482 aaKnown RBP13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 STXBP2Q15833 593 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 ANKRD20A2Q5SQ80 823 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 ANKRD20A1Q5TYW2 823 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 ANKRD20A3Q5VUR7 823 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 FAM160B1Q5W0V3 765 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 FAM91A1Q658Y4 838 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 SNRNP48Q6IEG0 339 aaKnown RBP13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 C4orf22Q6V702 233 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 CCDC125Q86Z20 511 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 TEPSINQ96N21 525 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 TRIM6Q9C030 488 aaPredicted RBP13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 C2orf40Q9H1Z8 148 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 MMADHCQ9H3L0 296 aaPredicted RBP13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 DCLRE1BQ9H816 532 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 FBXO40Q9UH90 709 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 GGT7Q9UJ14 662 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 ZFP69BQ9UJL9 534 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 KLF11O14901 512 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 SPAG7O75391 227 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 GSTA2P09210 222 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 MARK3P27448 753 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 CTCFP49711 727 aaPredicted RBP13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 ZNF252P-AS1Q0IIN9 211 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 TRPC3Q13507 836 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 MXD4Q14582 209 aaPredicted RBP13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 LGSNQ5TDP6 509 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 LVRNQ6Q4G3 990 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 TRMT1LQ7Z2T5 733 aaKnown RBP13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 PALM2Q8IXS6 379 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 TTC39CQ8N584 583 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 ASAP3Q8TDY4 903 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 ATG4CQ96DT6 458 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 TARS2Q9BW92 718 aaKnown RBP13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 RSAD1Q9HA92 442 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 CISHQ9NSE2 258 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 HOXC10Q9NYD6 342 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 CORO1CQ9ULV4 474 aaPredicted RBP13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 IKBKGQ9Y6K9 419 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 PTPRJQ12913 1337 aa13.01□□□□□ -0.33
TMEM39B-208ENST00000487305 ZNF541Q9H0D2 1346 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms