RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 ARHGAP28Q9P2N2 729 aa12.84□□□□□ -0.35
COL3A1-206ENST00000487010 STOML1Q9UBI4 398 aa12.84□□□□□ -0.35
COL3A1-206ENST00000487010 ZNF70Q9UC06 446 aaPredicted RBP12.84□□□□□ -0.35
COL3A1-206ENST00000487010 SNCAIPQ9Y6H5 919 aa12.84□□□□□ -0.35
COL3A1-206ENST00000487010 TCRBV5S1A1TA0A578 114 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 ENO4A6NNW6 628 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 HAUS5O94927 633 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
COL3A1-206ENST00000487010 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 ACOT2P49753 483 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 ARL4CP56559 192 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 RPS6P62753 249 aaKnown RBP12.83□□□□□ -0.36
COL3A1-206ENST00000487010 OGDHQ02218 1023 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 GAD2Q05329 585 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 KLC1Q07866 573 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 SGSM1Q2NKQ1 1148 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 MUM1Q2TAK8 710 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 KLHL38Q2WGJ6 581 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 C11orf91Q3C1V1 193 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 MSS51Q4VC12 460 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 DSTYKQ6XUX3 929 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 C3orf62Q6ZUJ4 267 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 APLFQ8IW19 511 aaPredicted RBP12.83□□□□□ -0.36
COL3A1-206ENST00000487010 PPIL6Q8IXY8 311 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 MCPH1Q8NEM0 835 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 ZNF606Q8WXB4 792 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 ALKBH8Q96BT7 664 aaKnown RBP12.83□□□□□ -0.36
COL3A1-206ENST00000487010 NSL1Q96IY1 281 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 PDCD2LQ9BRP1 358 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 TRIM55Q9BYV6 548 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 ACSS3Q9H6R3 686 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 RAVER2Q9HCJ3 691 aaKnown RBP12.83□□□□□ -0.36
COL3A1-206ENST00000487010 XPNPEP1Q9NQW7 623 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 DDX56Q9NY93 547 aaKnown RBP12.83□□□□□ -0.36
COL3A1-206ENST00000487010 SLC17A7Q9P2U7 560 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 HEY2Q9UBP5 337 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 GABBR1Q9UBS5 961 aa12.83□□□□□ -0.36
COL3A1-206ENST00000487010 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL3A1-206ENST00000487010 ZNF541Q9H0D2 1346 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 TESPA1A2RU30 521 aaPredicted RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 LRRD1A4D1F6 860 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 EME2A4GXA9 379 aaPredicted RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 CFAP69A5D8W1 941 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 NVLO15381 856 aaKnown RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 GSC2O15499 205 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 TBC1D12O60347 775 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 DGAT1O75907 488 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 UPP2O95045 317 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 CALB1P05937 261 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 TBXAS1P24557 533 aaPredicted RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 VHLP40337 213 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 ANKRD22Q5VYY1 191 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 APBB1IPQ7Z5R6 666 aaPredicted RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 NAT8LQ8N9F0 302 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 DCAKDQ8WVC6 231 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 CPT1BQ92523 772 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 ACSF2Q96CM8 615 aaPredicted RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 MCEEQ96PE7 176 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 RMDN3Q96TC7 470 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 SYT15Q9BQS2 421 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 C12orf65Q9H3J6 166 aaKnown RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 NMRK1Q9NWW6 199 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 AGO2Q9UKV8 859 aaKnown RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 NUB1Q9Y5A7 615 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 STYXL1Q9Y6J8 313 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 A0A0G2JND7 137 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 SIGLEC16A6NMB1 481 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 YDJCA8MPS7 323 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 E7ESA3 106 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 H0YCG3 227 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 GOLGA8RI6L899 631 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 DNAJC6O75061 913 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 PIAS1O75925 651 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 NPTXRO95502 500 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 TUBP50607 506 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 PIGHQ14442 188 aaPredicted RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 MEX3CQ5U5Q3 659 aaKnown RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 DNAJC24Q6P3W2 148 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 RHPN2Q8IUC4 686 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 PTPRN2Q92932 1015 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 FAM136AQ96C01 138 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 WDR83Q9BRX9 315 aaKnown RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 TSSK1BQ9BXA7 367 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 POLR3FQ9H1D9 316 aaPredicted RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 KCNK13Q9HB14 408 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 PXMP2Q9NR77 195 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 ZNRF3Q9ULT6 936 aa12.82□□□□□ -0.36
COL3A1-206ENST00000487010 MTO1Q9Y2Z2 717 aaKnown RBP12.82□□□□□ -0.36
COL3A1-206ENST00000487010 SPDYE5A6NIY4 337 aa12.81□□□□□ -0.36
COL3A1-206ENST00000487010 GYG2O15488 501 aa12.81□□□□□ -0.36
COL3A1-206ENST00000487010 FESP07332 822 aa12.81□□□□□ -0.36
COL3A1-206ENST00000487010 ABCD1P33897 745 aa12.81□□□□□ -0.36
COL3A1-206ENST00000487010 ZNF132P52740 706 aa12.81□□□□□ -0.36
COL3A1-206ENST00000487010 ARFIP2P53365 341 aa12.81□□□□□ -0.36
COL3A1-206ENST00000487010 MXRA7P84157 204 aa12.81□□□□□ -0.36
COL3A1-206ENST00000487010 RCN1Q15293 331 aa12.81□□□□□ -0.36
COL3A1-206ENST00000487010 CCDC6Q16204 474 aa12.81□□□□□ -0.36
COL3A1-206ENST00000487010 STYK1Q6J9G0 422 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms