RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ANKRD40Q6AI12 368 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 PARM1Q6UWI2 310 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 HFE2Q6ZVN8 426 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 SV2AQ7L0J3 742 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 ADSSL1Q8N142 457 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 SPATA20Q8TB22 786 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 PSMG2Q969U7 264 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 KXD1Q9BQD3 176 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 MKNK1Q9BUB5 465 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 GZF1Q9H116 711 aaPredicted RBP13.38□□□□□ -0.27
PTCD1-205ENST00000485746 MAGED2Q9UNF1 606 aaPredicted RBP13.38□□□□□ -0.27
PTCD1-205ENST00000485746 DUSP12Q9UNI6 340 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 A0A1W2PRU2 124 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 BICDL2A1A5D9 508 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 MYBPHLA2RUH7 354 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 ANHXE9PGG2 379 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 NARSO43776 548 aaKnown RBP13.37□□□□□ -0.27
PTCD1-205ENST00000485746 MICAL2O94851 1124 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 VNN1O95497 513 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 CFHP08603 1231 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 CYP2F1P24903 491 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 ANXA13P27216 316 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 GABRR2P28476 465 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 GRIK1P39086 918 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 CDH8P55286 799 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 HTR4Q13639 388 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 TEAD2Q15562 447 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 ZACNQ401N2 412 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 ZCWPW2Q504Y3 356 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 DCAF17Q5H9S7 520 aaPredicted RBP13.37□□□□□ -0.27
PTCD1-205ENST00000485746 MDH1BQ5I0G3 518 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 PRSS36Q5K4E3 855 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 GPR152Q8TDT2 470 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 KBTBD7Q8WVZ9 684 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 NELFBQ8WX92 580 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 TAF4BQ92750 862 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 ELMO3Q96BJ8 720 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 GBP4Q96PP9 640 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 GPR88Q9GZN0 384 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 DNAJC25Q9H1X3 360 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 TMEM8AQ9HCN3 771 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 ABCB6Q9NP58 842 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 CTNND2Q9UQB3 1225 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 HCN4Q9Y3Q4 1203 aa13.37□□□□□ -0.27
PTCD1-205ENST00000485746 TRIM49BA6NDI0 452 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 DPYSL4O14531 572 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 SLC16A3O15427 465 aaKnown RBP13.36□□□□□ -0.27
PTCD1-205ENST00000485746 CSH1P0DML2 217 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 CSH2P0DML3 217 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 SRFP11831 508 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 PTPN1P18031 435 aaKnown RBP13.36□□□□□ -0.27
PTCD1-205ENST00000485746 BDNFP23560 247 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 GTF2H1P32780 548 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 CCR2P41597 374 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 RAP1GAPP47736 663 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 GPR15P49685 360 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 EPHA5P54756 1037 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 ENPEPQ07075 957 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 DDR2Q16832 855 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 CCDC40Q4G0X9 1142 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 WDR44Q5JSH3 913 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 SDHAF4Q5VUM1 108 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 KRT39Q6A163 491 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 LIMS2Q7Z4I7 341 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 FGF14Q92915 247 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 MYLPFQ96A32 169 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 FUBP3Q96I24 572 aaKnown RBP eCLIP13.36□□□□□ -0.27
PTCD1-205ENST00000485746 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
PTCD1-205ENST00000485746 MED10Q9BTT4 135 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 DNAI2Q9GZS0 605 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 XYLT2Q9H1B5 865 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 SMYD3Q9H7B4 428 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 VRTNQ9H8Y1 702 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 ZFP14Q9HCL3 533 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 ARMCX3Q9UH62 379 aaPredicted RBP13.36□□□□□ -0.27
PTCD1-205ENST00000485746 VCANP13611 3396 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 ANK1P16157 1881 aa13.36□□□□□ -0.27
PTCD1-205ENST00000485746 GOLGA6L22H0YM25 854 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 CD44P16070 742 aaKnown RBP13.35□□□□□ -0.27
PTCD1-205ENST00000485746 ATF6P18850 670 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 CDC25CP30307 473 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 MXI1P50539 228 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 PMS1P54277 932 aaKnown RBP13.35□□□□□ -0.27
PTCD1-205ENST00000485746 STX17P56962 302 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 PPP3CAQ08209 521 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 MORC3Q14149 939 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 C1orf220Q5T0J3 134 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 GPR158Q5T848 1215 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 SPOPLQ6IQ16 392 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 FAM171BQ6P995 826 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 BMP8AQ7Z5Y6 402 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 TMC8Q8IU68 726 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 YAF2Q8IY57 180 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 SIX5Q8N196 739 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 FBXL6Q8N531 539 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 FLCNQ8NFG4 579 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 SHKBP1Q8TBC3 707 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 ZSCAN18Q8TBC5 510 aaPredicted RBP13.35□□□□□ -0.27
PTCD1-205ENST00000485746 MYCBPAPQ8TBZ2 947 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 SMARCD2Q92925 531 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms