RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 OLFML3Q9NRN5 406 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 GKN1Q9NS71 199 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 RAB23Q9ULC3 237 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 CCL26Q9Y258 94 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 FRMD3A2A2Y4 597 aa20.7■□□□□ 0.9
COL27A1-205ENST00000485397 K7ESF4 209 aa20.7■□□□□ 0.9
COL27A1-205ENST00000485397 HRO43593 1189 aa20.7■□□□□ 0.9
COL27A1-205ENST00000485397 LDHAP00338 332 aaKnown RBP20.7■□□□□ 0.9
COL27A1-205ENST00000485397 ACAT1P24752 427 aaKnown RBP20.7■□□□□ 0.9
COL27A1-205ENST00000485397 BFSP1Q12934 665 aa20.7■□□□□ 0.9
COL27A1-205ENST00000485397 SRSF5Q13243 272 aaKnown RBP20.7■□□□□ 0.9
COL27A1-205ENST00000485397 HEATR6Q6AI08 1181 aaKnown RBP20.7■□□□□ 0.9
COL27A1-205ENST00000485397 OSTM1Q86WC4 334 aa20.7■□□□□ 0.9
COL27A1-205ENST00000485397 CSGALNACT2Q8N6G5 542 aa20.7■□□□□ 0.9
COL27A1-205ENST00000485397 MAB21L3Q8N8X9 362 aa20.7■□□□□ 0.9
COL27A1-205ENST00000485397 CACTINQ8WUQ7 758 aaKnown RBP20.7■□□□□ 0.9
COL27A1-205ENST00000485397 PDE11AQ9HCR9 933 aa20.7■□□□□ 0.9
COL27A1-205ENST00000485397 FOXD4L1Q9NU39 408 aa20.7■□□□□ 0.9
COL27A1-205ENST00000485397 PANK4Q9NVE7 773 aa20.7■□□□□ 0.9
COL27A1-205ENST00000485397 THG1LQ9NWX6 298 aaKnown RBP20.7■□□□□ 0.9
COL27A1-205ENST00000485397 DDX43Q9NXZ2 648 aaKnown RBP20.7■□□□□ 0.9
COL27A1-205ENST00000485397 MAGED2Q9UNF1 606 aaPredicted RBP20.7■□□□□ 0.9
COL27A1-205ENST00000485397 MTMR6Q9Y217 621 aa20.7■□□□□ 0.9
COL27A1-205ENST00000485397 EXTL3O43909 919 aa20.69■□□□□ 0.9
COL27A1-205ENST00000485397 HUS1O60921 280 aa20.69■□□□□ 0.9
COL27A1-205ENST00000485397 ATXN1P54253 815 aaKnown RBP20.69■□□□□ 0.9
COL27A1-205ENST00000485397 SPEM2Q0P670 501 aa20.69■□□□□ 0.9
COL27A1-205ENST00000485397 CCINQ13939 588 aa20.69■□□□□ 0.9
COL27A1-205ENST00000485397 SLC39A14Q15043 492 aa20.69■□□□□ 0.9
COL27A1-205ENST00000485397 NFE2Q16621 373 aaPredicted RBP20.69■□□□□ 0.9
COL27A1-205ENST00000485397 DDR2Q16832 855 aa20.69■□□□□ 0.9
COL27A1-205ENST00000485397 CCDC142Q17RM4 750 aa20.69■□□□□ 0.9
COL27A1-205ENST00000485397 ITPRIPL2Q3MIP1 535 aa20.69■□□□□ 0.9
COL27A1-205ENST00000485397 TXNDC8Q6A555 127 aa20.69■□□□□ 0.9
COL27A1-205ENST00000485397 USP13Q92995 863 aaPredicted RBP20.69■□□□□ 0.9
COL27A1-205ENST00000485397 FAM83CQ9BQN1 747 aa20.69■□□□□ 0.9
COL27A1-205ENST00000485397 ACBD6Q9BR61 282 aa20.69■□□□□ 0.9
COL27A1-205ENST00000485397 HPS4Q9NQG7 708 aa20.69■□□□□ 0.9
COL27A1-205ENST00000485397 DMXL1Q9Y485 3027 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 HCRTO43612 131 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 PAPSS2O95340 614 aaPredicted RBP20.68■□□□□ 0.9
COL27A1-205ENST00000485397 KRT19P08727 400 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 CSH1P0DML2 217 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 CSH2P0DML3 217 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 CYP2F1P24903 491 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 AVPR1AP37288 418 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 LMNB2Q03252 620 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 ALCAMQ13740 583 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 SIM2Q14190 667 aaPredicted RBP20.68■□□□□ 0.9
COL27A1-205ENST00000485397 INTS6LQ5JSJ4 861 aaKnown RBP20.68■□□□□ 0.9
COL27A1-205ENST00000485397 LMBRD2Q68DH5 695 aaPredicted RBP20.68■□□□□ 0.9
COL27A1-205ENST00000485397 TRIM68Q6AZZ1 485 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 LAIR1Q6GTX8 287 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 LONP2Q86WA8 852 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 LRRC52Q8N7C0 313 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 PDILTQ8N807 584 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 RIN3Q8TB24 985 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 MTMR12Q9C0I1 747 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 SIX4Q9UIU6 781 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 ZMYM5Q9UJ78 669 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 GTF3C4Q9UKN8 822 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 ITGA11Q9UKX5 1188 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 SNX9Q9Y5X1 595 aa20.68■□□□□ 0.9
COL27A1-205ENST00000485397 OTOL1A6NHN0 477 aaPredicted RBP20.67■□□□□ 0.9
COL27A1-205ENST00000485397 PRR5-ARHGAP8B1AHC4 643 aa20.67■□□□□ 0.9
COL27A1-205ENST00000485397 RBP5P82980 135 aa20.67■□□□□ 0.9
COL27A1-205ENST00000485397 ARHGAP8P85298 464 aa20.67■□□□□ 0.9
COL27A1-205ENST00000485397 MYL7Q01449 175 aa20.67■□□□□ 0.9
COL27A1-205ENST00000485397 PKN3Q6P5Z2 889 aa20.67■□□□□ 0.9
COL27A1-205ENST00000485397 TMEM86AQ8N2M4 240 aa20.67■□□□□ 0.9
COL27A1-205ENST00000485397 GLIS3Q8NEA6 775 aa20.67■□□□□ 0.9
COL27A1-205ENST00000485397 LEO1Q8WVC0 666 aaPredicted RBP20.67■□□□□ 0.9
COL27A1-205ENST00000485397 MRPS31Q92665 395 aaKnown RBP20.67■□□□□ 0.9
COL27A1-205ENST00000485397 HPS3Q969F9 1004 aa20.67■□□□□ 0.9
COL27A1-205ENST00000485397 PKMYT1Q99640 499 aa20.67■□□□□ 0.9
COL27A1-205ENST00000485397 EBF3Q9H4W6 596 aa20.67■□□□□ 0.9
COL27A1-205ENST00000485397 TMEM206Q9H813 350 aa20.67■□□□□ 0.9
COL27A1-205ENST00000485397 GDAP2Q9NXN4 497 aa20.67■□□□□ 0.9
COL27A1-205ENST00000485397 MORC2Q9Y6X9 1032 aaPredicted RBP20.67■□□□□ 0.9
COL27A1-205ENST00000485397 DNAH14Q0VDD8 3507 aa20.66■□□□□ 0.9
COL27A1-205ENST00000485397 TADA3O75528 432 aa20.66■□□□□ 0.9
COL27A1-205ENST00000485397 RETP07949 1114 aa20.66■□□□□ 0.9
COL27A1-205ENST00000485397 TMEM191BP0C7N4 346 aa20.66■□□□□ 0.9
COL27A1-205ENST00000485397 DDX6P26196 483 aaKnown RBP eCLIP20.66■□□□□ 0.9
COL27A1-205ENST00000485397 RUNX3Q13761 415 aa20.66■□□□□ 0.9
COL27A1-205ENST00000485397 MON1AQ86VX9 555 aa20.66■□□□□ 0.9
COL27A1-205ENST00000485397 GPD1LQ8N335 351 aa20.66■□□□□ 0.9
COL27A1-205ENST00000485397 SYNPOQ8N3V7 929 aa20.66■□□□□ 0.9
COL27A1-205ENST00000485397 CHFRQ96EP1 664 aa20.66■□□□□ 0.9
COL27A1-205ENST00000485397 TDP1Q9NUW8 608 aa20.66■□□□□ 0.9
COL27A1-205ENST00000485397 CDV3Q9UKY7 258 aaKnown RBP20.66■□□□□ 0.9
COL27A1-205ENST00000485397 KIF26AQ9ULI4 1882 aaPredicted RBP20.66■□□□□ 0.9
COL27A1-205ENST00000485397 PTPRJQ12913 1337 aa20.65■□□□□ 0.9
COL27A1-205ENST00000485397 NOL4O94818 638 aa20.65■□□□□ 0.9
COL27A1-205ENST00000485397 ARSAP15289 507 aa20.65■□□□□ 0.9
COL27A1-205ENST00000485397 SDHBP21912 280 aa20.65■□□□□ 0.9
COL27A1-205ENST00000485397 NASPP49321 788 aaPredicted RBP20.65■□□□□ 0.9
COL27A1-205ENST00000485397 RPL10AP62906 217 aaKnown RBP20.65■□□□□ 0.9
COL27A1-205ENST00000485397 SOWAHAQ2M3V2 549 aa20.65■□□□□ 0.9
COL27A1-205ENST00000485397 FSTL4Q6MZW2 842 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms