RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 HCRTO43612 131 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 CCDC192P0DO97 292 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 PTMSP20962 102 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 GNL1P36915 607 aaPredicted RBP16.97■□□□□ 0.31
UPF3A-208ENST00000484246 MAGEA11P43364 429 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 FMO5P49326 533 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 PABPC1LQ4VXU2 614 aaKnown RBP16.97■□□□□ 0.31
UPF3A-208ENST00000484246 C4orf50Q6ZRC1 276 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 UNC93AQ86WB7 457 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 ELMOD1Q8N336 334 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 OR6B3Q8NGW1 331 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 MYCBPAPQ8TBZ2 947 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 ACSF2Q96CM8 615 aaPredicted RBP16.97■□□□□ 0.31
UPF3A-208ENST00000484246 RPGRIP1Q96KN7 1286 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 CEP295NLQ96MC4 621 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 PI4K2AQ9BTU6 479 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 THAP9Q9H5L6 903 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 ABI2Q9NYB9 513 aaPredicted RBP16.97■□□□□ 0.31
UPF3A-208ENST00000484246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.97■□□□□ 0.31
UPF3A-208ENST00000484246 CEP72Q9P209 647 aa16.97■□□□□ 0.31
UPF3A-208ENST00000484246 RHOP08100 348 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 PTPN2P17706 415 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 ATF6P18850 670 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 FSHRP23945 695 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 ALDH1A3P47895 512 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 EPHB3P54753 998 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 PRSS36Q5K4E3 855 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 IQCEQ6IPM2 695 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 SPOPLQ6IQ16 392 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 VSTM1Q6UX27 236 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 IRF2BP1Q8IU81 584 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 TTC39CQ8N584 583 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 B3GALNT2Q8NCR0 500 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 PSMG2Q969U7 264 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 MYLPFQ96A32 169 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 TNIP3Q96KP6 325 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 LRRC3Q9BY71 257 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 MMRN2Q9H8L6 949 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 TMEM63CQ9P1W3 806 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 GTF3C4Q9UKN8 822 aa16.96■□□□□ 0.31
UPF3A-208ENST00000484246 A8MXQ7 604 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 SSTR3P32745 418 aaPredicted RBP16.95■□□□□ 0.3
UPF3A-208ENST00000484246 CDH8P55286 799 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 PSMC1P62191 440 aaKnown RBP16.95■□□□□ 0.3
UPF3A-208ENST00000484246 NTHL1P78549 312 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 CCDC142Q17RM4 750 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 KLHL40Q2TBA0 621 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 MGAT5BQ3V5L5 792 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 SCARA5Q6ZMJ2 495 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 ITIH5Q86UX2 942 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 TMC8Q8IU68 726 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 SPATA2LQ8IUW3 424 aaPredicted RBP16.95■□□□□ 0.3
UPF3A-208ENST00000484246 CRYBG2Q8N1P7 616 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 ENOX1Q8TC92 643 aaKnown RBP16.95■□□□□ 0.3
UPF3A-208ENST00000484246 PCED1BQ96HM7 432 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 CNOT6LQ96LI5 555 aaKnown RBP16.95■□□□□ 0.3
UPF3A-208ENST00000484246 ZNF512Q96ME7 567 aaPredicted RBP16.95■□□□□ 0.3
UPF3A-208ENST00000484246 MYADMQ96S97 322 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 SEPT5Q99719 369 aaPredicted RBP16.95■□□□□ 0.3
UPF3A-208ENST00000484246 ANO10Q9NW15 660 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 HCFC1R1Q9NWW0 138 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 CDH7Q9ULB5 785 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 SLC27A5Q9Y2P5 690 aa16.95■□□□□ 0.3
UPF3A-208ENST00000484246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.95■□□□□ 0.3
UPF3A-208ENST00000484246 MTCL1Q9Y4B5 1905 aaKnown RBP16.95■□□□□ 0.3
UPF3A-208ENST00000484246 MUC3AQ02505 3323 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 ZNF197O14709 1029 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 ATP2C2O75185 946 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 LRRN2O75325 713 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 FGF19O95750 216 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 AFPP02771 609 aaKnown RBP16.94■□□□□ 0.3
UPF3A-208ENST00000484246 PRKCSHP14314 528 aaPredicted RBP16.94■□□□□ 0.3
UPF3A-208ENST00000484246 PTPN1P18031 435 aaKnown RBP16.94■□□□□ 0.3
UPF3A-208ENST00000484246 RAP1GAPP47736 663 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 RPL10AP62906 217 aaKnown RBP16.94■□□□□ 0.3
UPF3A-208ENST00000484246 VEPH1Q14D04 833 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 STX1AQ16623 288 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 SLC5A9Q2M3M2 681 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 WDR44Q5JSH3 913 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 SASS6Q6UVJ0 657 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 GET4Q7L5D6 327 aaPredicted RBP16.94■□□□□ 0.3
UPF3A-208ENST00000484246 RNF135Q8IUD6 432 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 FAM114A1Q8IWE2 563 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 LMO3Q8TAP4 145 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 ELMO3Q96BJ8 720 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 ELOVL4Q9GZR5 314 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 DPEP3Q9H4B8 488 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 ASAH2Q9NR71 780 aa16.94■□□□□ 0.3
UPF3A-208ENST00000484246 CILPO75339 1184 aa16.93■□□□□ 0.3
UPF3A-208ENST00000484246 PDGFRBP09619 1106 aa16.93■□□□□ 0.3
UPF3A-208ENST00000484246 COL9A1P20849 921 aa16.93■□□□□ 0.3
UPF3A-208ENST00000484246 NDST1P52848 882 aa16.93■□□□□ 0.3
UPF3A-208ENST00000484246 CETN1Q12798 172 aa16.93■□□□□ 0.3
UPF3A-208ENST00000484246 KCNH2Q12809 1159 aa16.93■□□□□ 0.3
UPF3A-208ENST00000484246 MDH1BQ5I0G3 518 aa16.93■□□□□ 0.3
UPF3A-208ENST00000484246 SMYD5Q6GMV2 418 aa16.93■□□□□ 0.3
UPF3A-208ENST00000484246 PDZD4Q76G19 769 aaPredicted RBP16.93■□□□□ 0.3
UPF3A-208ENST00000484246 DNAJB7Q7Z6W7 309 aaPredicted RBP16.93■□□□□ 0.3
UPF3A-208ENST00000484246 NPAS3Q8IXF0 933 aa16.93■□□□□ 0.3
UPF3A-208ENST00000484246 ITFG1Q8TB96 612 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms