RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 SNAP25P60880 206 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 DLG4P78352 724 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 KRT17Q04695 432 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 PPP3CAQ08209 521 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 DLG1Q12959 904 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 SMUG1Q53HV7 270 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 SFT2D3Q587I9 215 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 FAM182BQ5T319 152 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 ZNF746Q6NUN9 644 aaPredicted RBP12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 TATDN1Q6P1N9 297 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 TMEM179Q6ZVK1 233 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 SNF8Q96H20 258 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 NSL1Q96IY1 281 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 POP1Q99575 1024 aaKnown RBP12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 HNRNPABQ99729 332 aaKnown RBP12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 TCHPQ9BT92 498 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 KANSL3Q9P2N6 904 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 ACTL7BQ9Y614 415 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 A8MXQ7 604 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 ZBTB39O15060 712 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 BUD23O43709 281 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 NDUFB10O96000 172 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 TFAP2AP05549 437 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 MAPTP10636 758 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 FGFR1P11362 822 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 ADRA2BP18089 450 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 IVDP26440 423 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 NAA20P61599 178 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 HNRNPDQ14103 355 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 NADK2Q4G0N4 442 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 KCTD21Q4G0X4 260 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 C1orf220Q5T0J3 134 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 Q6ZNX1 250 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 PATL1Q86TB9 770 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 PDSS2Q86YH6 399 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 METTL25Q8N6Q8 603 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 ZFP28Q8NHY6 868 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 TRPV5Q9NQA5 729 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 ITGB1BP2Q9UKP3 347 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 DOLKQ9UPQ8 538 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 E9PBE3 544 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 WDR46O15213 610 aaKnown RBP12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 SGPL1O95470 568 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 PIM1P11309 404 aaPredicted RBP12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 CETN2P41208 172 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 RELAQ04206 551 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 TMED2Q15363 201 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 CLPPQ16740 277 aaPredicted RBP12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 SHROOM1Q2M3G4 852 aaPredicted RBP12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 SGO2Q562F6 1265 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 ZFPM1Q8IX07 1006 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 DAW1Q8N136 415 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 BBS5Q8N3I7 341 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 RFWD2Q8NHY2 731 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 WDR11Q9BZH6 1224 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 TMEM206Q9H813 350 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 CYLDQ9NQC7 956 aa12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 WRAP73Q9P2S5 460 aaPredicted RBP12.14□□□□□ -0.47
SEC61A1-205ENST00000483956 FBP2O00757 339 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 CHMP2AO43633 222 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 CPA2P48052 419 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 FMO1Q01740 532 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 PPIDQ08752 370 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 OVGP1Q12889 678 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 MSLNQ13421 630 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 LPIN1Q14693 890 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 B3GNT9Q6UX72 402 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 RIPOR1Q6ZS17 1223 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 SHC3Q92529 594 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 FBXO6Q9NRD1 293 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 PI4KBQ9UBF8 816 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 TELO2Q9Y4R8 837 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 HEMK1Q9Y5R4 338 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 TXNDC9O14530 226 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 CLDN3O15551 220 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 SORBS3O60504 671 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 DKC1O60832 514 aaKnown RBP eCLIP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 GAS7O60861 476 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 PDGFRBP09619 1106 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 DLATP10515 647 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 SLC5A2P31639 672 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 SCNN1DP51172 638 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 AP2B1P63010 937 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 SPARCL1Q14515 664 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 PDK3Q15120 406 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 PDCD4Q53EL6 469 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 RELL1Q8IUW5 271 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 SP8Q8IXZ3 490 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 ANKRD35Q8N283 1001 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 SLC25A41Q8N5S1 370 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 RDH13Q8NBN7 331 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 GRK7Q8WTQ7 553 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 CLIP3Q96DZ5 547 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 CLPTM1LQ96KA5 538 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 PANX3Q96QZ0 392 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 GRIP2Q9C0E4 1043 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms