RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 HAUS2Q9NVX0 235 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 ASH2LQ9UBL3 628 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 GIMAP2Q9UG22 337 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 VPS28Q9UK41 221 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 FEM1BQ9UK73 627 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 ZDHHC9Q9Y397 364 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 TDRD9Q8NDG6 1382 aaKnown RBP5.02□□□□□ -1.61
PTCD3-214ENST00000483925 TRIM43BA6NCK2 446 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 HMX3A6NHT5 357 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 PIP5K1BO14986 540 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 OPHN1O60890 802 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 STARD3NLO95772 234 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 BAG2O95816 211 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 AMHP03971 560 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 SLPIP03973 132 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 APOA4P06727 396 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 MALP21145 153 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 MC4RP32245 332 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 POLD2P49005 469 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 AARSP49588 968 aaKnown RBP eCLIP5.01□□□□□ -1.61
PTCD3-214ENST00000483925 CHRNDQ07001 517 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 NFATC3Q12968 1075 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 HECTD3Q5T447 861 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 ACAD10Q6JQN1 1059 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 TRMT10BQ6PF06 316 aaKnown RBP5.01□□□□□ -1.61
PTCD3-214ENST00000483925 ZNF783Q6ZMS7 281 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 PALM2Q8IXS6 379 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 RPAP2Q8IXW5 612 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-214ENST00000483925 NRSN1Q8IZ57 195 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 NDUFAF2Q8N183 169 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 IPO4Q8TEX9 1081 aaKnown RBP5.01□□□□□ -1.61
PTCD3-214ENST00000483925 AFG1LQ8WV93 481 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 ZCCHC14Q8WYQ9 949 aaKnown RBP5.01□□□□□ -1.61
PTCD3-214ENST00000483925 RSPH1Q8WYR4 309 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 ST8SIA4Q92187 359 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 ZUFSPQ96AP4 578 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 TRIM43Q96BQ3 446 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-214ENST00000483925 CYFIP2Q96F07 1278 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 RADILQ96JH8 1075 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 HIST1H2AHQ96KK5 128 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 MRGPRX4Q96LA9 322 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 HIST1H2AJQ99878 128 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 VRK1Q99986 396 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-214ENST00000483925 GDF15Q99988 308 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 NOL10Q9BSC4 688 aaKnown RBP5.01□□□□□ -1.61
PTCD3-214ENST00000483925 TRIM54Q9BYV2 358 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 PAIP1Q9H074 479 aaKnown RBP5.01□□□□□ -1.61
PTCD3-214ENST00000483925 GHITMQ9H3K2 345 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 MTG2Q9H4K7 406 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 PLSCR4Q9NRQ2 329 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 TMEM160Q9NX00 188 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 TCAF1Q9Y4C2 921 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 TELO2Q9Y4R8 837 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 PCDHA1Q9Y5I3 950 aa5.01□□□□□ -1.61
PTCD3-214ENST00000483925 SETD1BQ9UPS6 1966 aaKnown RBP5□□□□□ -1.61
PTCD3-214ENST00000483925 RSF1Q96T23 1441 aaPredicted RBP5□□□□□ -1.61
PTCD3-214ENST00000483925 PATE3B3GLJ2 98 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 MASP2O00187 686 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 DOK2O60496 412 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 ZNF623O75123 536 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 PHF2O75151 1096 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 TMEM127O75204 238 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 URI1O94763 535 aaPredicted RBP5□□□□□ -1.61
PTCD3-214ENST00000483925 INMTO95050 263 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 FSBPO95073 299 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 TNFRSF6BO95407 300 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 RARBP10826 455 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 CLK1P49759 484 aaKnown RBP5□□□□□ -1.61
PTCD3-214ENST00000483925 RGS3P49796 1198 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 SELENOPP49908 381 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 ARFIP2P53365 341 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 ACTR2P61160 394 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 SLC12A1Q13621 1099 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 ERV3-1Q14264 604 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 NOLC1Q14978 699 aaKnown RBP eCLIP5□□□□□ -1.61
PTCD3-214ENST00000483925 RILPL1Q5EBL4 403 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 LIN54Q6MZP7 749 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 SLC30A6Q6NXT4 461 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 TMC5Q6UXY8 1006 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 GAREM2Q75VX8 874 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 RBM12BQ8IXT5 1001 aaKnown RBP5□□□□□ -1.61
PTCD3-214ENST00000483925 TEX11Q8IYF3 940 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 CCDC191Q8NCU4 936 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 TTLL11Q8NHH1 800 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 ZNF384Q8TF68 577 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 CLEC4DQ8WXI8 215 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 LRRC46Q96FV0 321 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 SPATA17Q96L03 361 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 SNX27Q96L92 541 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 COG8Q96MW5 612 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 DMRTA2Q96SC8 542 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 PRPF18Q99633 342 aaKnown RBP5□□□□□ -1.61
PTCD3-214ENST00000483925 SLF1Q9BQI6 1058 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 DDX23Q9BUQ8 820 aaKnown RBP5□□□□□ -1.61
PTCD3-214ENST00000483925 MRPL9Q9BYD2 267 aaKnown RBP5□□□□□ -1.61
PTCD3-214ENST00000483925 AGXT2Q9BYV1 514 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 DPH1Q9BZG8 443 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 ZNF518BQ9C0D4 1074 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 MRGBPQ9NV56 204 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 HSPBP1Q9NZL4 362 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms