RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 KANSL3Q9P2N6 904 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 HCSTQ9UBK5 93 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 TJP2Q9UDY2 1190 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 CNOT8Q9UFF9 292 aaKnown RBP10.72□□□□□ -0.69
HDAC6-226ENST00000483656 TIMM13Q9Y5L4 95 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-226ENST00000483656 CTAGE9A4FU28 777 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 TMEM189-UBE2V1I3L0A0 370 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 RIOK3O14730 519 aaKnown RBP10.71□□□□□ -0.69
HDAC6-226ENST00000483656 BUB1BO60566 1050 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-226ENST00000483656 ATP2C2O75185 946 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 GABBR2O75899 941 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 URI1O94763 535 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-226ENST00000483656 FTCDO95954 541 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 CYP11A1P05108 521 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 CSF2RAP15509 400 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 PAX3P23760 479 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 ACAT1P24752 427 aaKnown RBP10.71□□□□□ -0.69
HDAC6-226ENST00000483656 NAP1L1P55209 391 aaKnown RBP10.71□□□□□ -0.69
HDAC6-226ENST00000483656 COL4A6Q14031 1691 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 IKBKEQ14164 716 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 GOLGA7BQ2TAP0 167 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 PTPN20Q4JDL3 420 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 MEI1Q5TIA1 1274 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 PLEKHA7Q6IQ23 1121 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 MFSD5Q6N075 450 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 MICAL3Q7RTP6 2002 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 TTC30AQ86WT1 665 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 RHOT2Q8IXI1 618 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 TMEM86AQ8N2M4 240 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 HASPINQ8TF76 798 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 VCPIP1Q96JH7 1222 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 SUSD3Q96L08 255 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 NUP85Q9BW27 656 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 TLR10Q9BXR5 811 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 CRTAC1Q9NQ79 661 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 PRDM5Q9NQX1 630 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-226ENST00000483656 FAM49BQ9NUQ9 324 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 CTTNBP2NLQ9P2B4 639 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 TSPAN16Q9UKR8 245 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 LRFN2Q9ULH4 789 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 JRKLQ9Y4A0 524 aa10.71□□□□□ -0.69
HDAC6-226ENST00000483656 MYH10P35580 1976 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 TBKBP1A7MCY6 615 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 M0QYV0 167 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 TULP2O00295 520 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 HOXA2O43364 376 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 GJB6O95452 261 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 MYBL1P10243 752 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 CCDC130P13994 396 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 PTPN1P18031 435 aaKnown RBP10.7□□□□□ -0.7
HDAC6-226ENST00000483656 TKTP29401 623 aaKnown RBP10.7□□□□□ -0.7
HDAC6-226ENST00000483656 OR1G1P47890 313 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 SLC11A1P49279 550 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 PSMC1P62191 440 aaKnown RBP10.7□□□□□ -0.7
HDAC6-226ENST00000483656 MAMLD1Q13495 774 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 STILQ15468 1287 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 IFI16Q16666 785 aaKnown RBP10.7□□□□□ -0.7
HDAC6-226ENST00000483656 PPP1R2P3Q6NXS1 205 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 PAQR9Q6ZVX9 377 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 C16orf59Q7L2K0 433 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 ERICH1Q86X53 443 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 CPNE8Q86YQ8 564 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 TRIM11Q96F44 468 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 BTBD6Q96KE9 485 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 ALS2CR12Q96Q35 445 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 CPXM1Q96SM3 734 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 TRIM7Q9C029 511 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 MARCH5Q9NX47 278 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 DDX43Q9NXZ2 648 aaKnown RBP10.7□□□□□ -0.7
HDAC6-226ENST00000483656 UVRAGQ9P2Y5 699 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 PCDHB8Q9UN66 801 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 PRG3Q9Y2Y8 225 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-226ENST00000483656 MRFAP1Q9Y605 127 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 TSC2P49815 1807 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 LTBP2Q14767 1821 aa10.7□□□□□ -0.7
HDAC6-226ENST00000483656 ALPK3Q96L96 1907 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 ABHD14A-ACY1A0A1B0GW23 586 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 MYBPHLA2RUH7 354 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 NRP1O14786 923 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 SRGAP2O75044 1071 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 DGKIO75912 1065 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 ERBB2P04626 1255 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 CALB1P05937 261 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 ACRP10323 421 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 ODC1P11926 461 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 RAG1P15918 1043 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 TYMPP19971 482 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 GABRB2P47870 512 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 LHX1P48742 406 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 DEFB103AP81534 67 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 RNASELQ05823 741 aaKnown RBP10.69□□□□□ -0.7
HDAC6-226ENST00000483656 PDE4CQ08493 712 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 PDCLQ13371 301 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 PPP1R15BQ5SWA1 713 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 CYP4A22Q5TCH4 519 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 LIN9Q5TKA1 542 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 NT5DC3Q86UY8 548 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 ABI1Q8IZP0 508 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 FUKQ8N0W3 1084 aa10.69□□□□□ -0.7
HDAC6-226ENST00000483656 ANKRD52Q8NB46 1076 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms