RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 THEM5Q8N1Q8 247 aa15□□□□□ -0.01
VARS-226ENST00000483275 NETO1Q8TDF5 533 aa15□□□□□ -0.01
VARS-226ENST00000483275 TSPAN18Q96SJ8 248 aa15□□□□□ -0.01
VARS-226ENST00000483275 FBRSL1Q9HCM7 1045 aaKnown RBP15□□□□□ -0.01
VARS-226ENST00000483275 RXFP3Q9NSD7 469 aa15□□□□□ -0.01
VARS-226ENST00000483275 DSEQ9UL01 958 aa15□□□□□ -0.01
VARS-226ENST00000483275 GTF3C5Q9Y5Q8 519 aaPredicted RBP15□□□□□ -0.01
VARS-226ENST00000483275 CHD6Q8TD26 2715 aa15□□□□□ -0.01
VARS-226ENST00000483275 PTPRDP23468 1912 aa15□□□□□ -0.01
VARS-226ENST00000483275 CFAP47Q6ZTR5 3102 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 VPS37CA5D8V6 355 aaPredicted RBP14.99□□□□□ -0.01
VARS-226ENST00000483275 GOLGA8IPA6NC78 632 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 MYMKA6NI61 221 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 GOLGA8JA6NMD2 632 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 KPNA7A9QM74 516 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 SLC30A4O14863 429 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 AXIN1O15169 862 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 PRPF40AO75400 957 aaKnown RBP14.99□□□□□ -0.01
VARS-226ENST00000483275 TADA3O75528 432 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 EGFP01133 1207 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 ITGB3P05106 788 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 AVPR1AP37288 418 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 BFSP1Q12934 665 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 CSRP2Q16527 193 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 DDR2Q16832 855 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 SV2CQ496J9 727 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 FAM173BQ6P4H8 233 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 KBTBD6Q86V97 674 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 PDCL2Q8N4E4 241 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 CLIC6Q96NY7 704 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 HHIPQ96QV1 700 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 FAM83CQ9BQN1 747 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 ASB7Q9H672 318 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 TRPC7Q9HCX4 862 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 OBP2AQ9NY56 170 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 HSFX1Q9UBD0 423 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 L1RE1Q9UN81 338 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 CLIC4Q9Y696 253 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 STYXL1Q9Y6J8 313 aa14.99□□□□□ -0.01
VARS-226ENST00000483275 SLC26A4O43511 780 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 RNF40O75150 1001 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 PPP1R37O75864 691 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 F11P03951 625 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 CYP2F1P24903 491 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 PLCB2Q00722 1185 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 LMBRD2Q68DH5 695 aaPredicted RBP14.98□□□□□ -0.01
VARS-226ENST00000483275 C1orf228Q6PIY5 440 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 ZNF720Q7Z2F6 126 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 WDR5BQ86VZ2 330 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 OSTM1Q86WC4 334 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 C1orf127Q8N9H9 656 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 KRI1Q8N9T8 703 aaKnown RBP14.98□□□□□ -0.01
VARS-226ENST00000483275 SPPL2BQ8TCT7 592 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 SLC22A12Q96S37 553 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 ARRDC1-AS1Q9H2J1 176 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 MRPL44Q9H9J2 332 aaKnown RBP14.98□□□□□ -0.01
VARS-226ENST00000483275 THG1LQ9NWX6 298 aaKnown RBP14.98□□□□□ -0.01
VARS-226ENST00000483275 AGAP1Q9UPQ3 857 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 PCDHB5Q9Y5E4 795 aa14.98□□□□□ -0.01
VARS-226ENST00000483275 LRP3O75074 770 aa14.97□□□□□ -0.01
VARS-226ENST00000483275 RPP40O75818 363 aaKnown RBP14.97□□□□□ -0.01
VARS-226ENST00000483275 ADRB1P08588 477 aa14.97□□□□□ -0.01
VARS-226ENST00000483275 CEBPZQ03701 1054 aaKnown RBP14.97□□□□□ -0.01
VARS-226ENST00000483275 RUNX3Q13761 415 aa14.97□□□□□ -0.01
VARS-226ENST00000483275 AASDHQ4L235 1098 aaPredicted RBP14.97□□□□□ -0.01
VARS-226ENST00000483275 TMEM196Q5HYL7 178 aa14.97□□□□□ -0.01
VARS-226ENST00000483275 SLFN12LQ6IEE8 588 aa14.97□□□□□ -0.01
VARS-226ENST00000483275 DCP1BQ8IZD4 617 aaKnown RBP14.97□□□□□ -0.01
VARS-226ENST00000483275 ZNF560Q96MR9 790 aa14.97□□□□□ -0.01
VARS-226ENST00000483275 CCSER1Q9C0I3 900 aa14.97□□□□□ -0.01
VARS-226ENST00000483275 TDP1Q9NUW8 608 aa14.97□□□□□ -0.01
VARS-226ENST00000483275 DDX43Q9NXZ2 648 aaKnown RBP14.97□□□□□ -0.01
VARS-226ENST00000483275 WNT6Q9Y6F9 365 aa14.97□□□□□ -0.01
VARS-226ENST00000483275 ZFHX4Q86UP3 3567 aa14.97□□□□□ -0.01
VARS-226ENST00000483275 PTPRJQ12913 1337 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 ANTXRLA6NF34 631 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 IL18RAPO95256 599 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 GCNT3O95395 438 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 KRT19P08727 400 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 CCDC192P0DO97 292 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 SCP2P22307 547 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 WEE1P30291 646 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 TSPY1Q01534 308 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 GRSF1Q12849 480 aaKnown RBP eCLIP14.96□□□□□ -0.01
VARS-226ENST00000483275 PTPAQ15257 358 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 TCEAL6Q6IPX3 200 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 BRAPQ7Z569 592 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 BRSK2Q8IWQ3 736 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 C2orf15Q8WU43 125 aaKnown RBP14.96□□□□□ -0.01
VARS-226ENST00000483275 GAB3Q8WWW8 586 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 NUP205Q92621 2012 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 EZH1Q92800 747 aaPredicted RBP14.96□□□□□ -0.01
VARS-226ENST00000483275 TCEAL3Q969E4 200 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 DNAJC19Q96DA6 116 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 CYP2S1Q96SQ9 504 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 CBWD1Q9BRT8 395 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 MTMR12Q9C0I1 747 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 ST6GALNAC4Q9H4F1 302 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 PCIF1Q9H4Z3 704 aa14.96□□□□□ -0.01
VARS-226ENST00000483275 PDE11AQ9HCR9 933 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms