RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 SLC27A5Q9Y2P5 690 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 PCDHB5Q9Y5E4 795 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 MYBPHLA2RUH7 354 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 A8MXQ7 604 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 C2CD4DB7Z1M9 353 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 TNFRSF10AO00220 468 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 N4BP1O75113 896 aaKnown RBP9.37□□□□□ -0.91
SNX4-205ENST00000482965 ATP2C2O75185 946 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 SOAT2O75908 522 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 PTPN2P17706 415 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 FSHRP23945 695 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 LMO2P25791 158 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 ERCC5P28715 1186 aaPredicted RBP9.37□□□□□ -0.91
SNX4-205ENST00000482965 GBP2P32456 591 aaPredicted RBP9.37□□□□□ -0.91
SNX4-205ENST00000482965 FMO5P49326 533 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 TUFMP49411 452 aaKnown RBP9.37□□□□□ -0.91
SNX4-205ENST00000482965 CLCN6P51797 869 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 EPHB3P54753 998 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 CDH8P55286 799 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 MAPRE1Q15691 268 aaKnown RBP9.37□□□□□ -0.91
SNX4-205ENST00000482965 CBWD6Q4V339 395 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 PABPC1LQ4VXU2 614 aaKnown RBP9.37□□□□□ -0.91
SNX4-205ENST00000482965 WDR44Q5JSH3 913 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 CBWD3Q5JTY5 395 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 CBWD5Q5RIA9 395 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 IQCEQ6IPM2 695 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 C4orf50Q6ZRC1 276 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 RBM43Q6ZSC3 357 aaKnown RBP9.37□□□□□ -0.91
SNX4-205ENST00000482965 CREBRFQ8IUR6 639 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 SPATA2LQ8IUW3 424 aaPredicted RBP9.37□□□□□ -0.91
SNX4-205ENST00000482965 FAM200AQ8TCP9 573 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 SEMA4DQ92854 862 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 CNOT6LQ96LI5 555 aaKnown RBP9.37□□□□□ -0.91
SNX4-205ENST00000482965 ZNF512Q96ME7 567 aaPredicted RBP9.37□□□□□ -0.91
SNX4-205ENST00000482965 CORO1BQ9BR76 489 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 NIF3L1Q9GZT8 377 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 SDCBP2Q9H190 292 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 CD320Q9NPF0 282 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 RAB20Q9NX57 234 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 DNMT3BQ9UBC3 853 aaKnown RBP9.37□□□□□ -0.91
SNX4-205ENST00000482965 HSFX1Q9UBD0 423 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 USTQ9Y2C2 406 aa9.37□□□□□ -0.91
SNX4-205ENST00000482965 SPTBN5Q9NRC6 3674 aaKnown RBP9.37□□□□□ -0.91
SNX4-205ENST00000482965 CUL9Q8IWT3 2517 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 LRRN2O75325 713 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 RHOP08100 348 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 HAPLN1P10915 354 aaPredicted RBP9.36□□□□□ -0.91
SNX4-205ENST00000482965 PTPN1P18031 435 aaKnown RBP9.36□□□□□ -0.91
SNX4-205ENST00000482965 PTMSP20962 102 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 ASPAP45381 313 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 MARSP56192 900 aaKnown RBP9.36□□□□□ -0.91
SNX4-205ENST00000482965 CYP27A1Q02318 531 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 CETN1Q12798 172 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 PDAP1Q13442 181 aaKnown RBP9.36□□□□□ -0.91
SNX4-205ENST00000482965 VEPH1Q14D04 833 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 TAF12Q16514 161 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 CCDC142Q17RM4 750 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 MDH1BQ5I0G3 518 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 CT47A1Q5JQC4 288 aaPredicted RBP9.36□□□□□ -0.91
SNX4-205ENST00000482965 CYP4A22Q5TCH4 519 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 CAVIN1Q6NZI2 390 aaKnown RBP9.36□□□□□ -0.91
SNX4-205ENST00000482965 FAM171BQ6P995 826 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 PDZD4Q76G19 769 aaPredicted RBP9.36□□□□□ -0.91
SNX4-205ENST00000482965 ITIH5Q86UX2 942 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 RNF135Q8IUD6 432 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 FAM114A1Q8IWE2 563 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 TRIM59Q8IWR1 403 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 B3GALNT2Q8NCR0 500 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 MYLPFQ96A32 169 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 FUBP3Q96I24 572 aaKnown RBP eCLIP9.36□□□□□ -0.91
SNX4-205ENST00000482965 MED15Q96RN5 788 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 MYADMQ96S97 322 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 PKMYT1Q99640 499 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 LPIN3Q9BQK8 851 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 BCO2Q9BYV7 579 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 DNAJC25Q9H1X3 360 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 DPEP3Q9H4B8 488 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 CYP3A43Q9HB55 503 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 APOBEC3GQ9HC16 384 aaKnown RBP9.36□□□□□ -0.91
SNX4-205ENST00000482965 ABCB6Q9NP58 842 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 CRTAC1Q9NQ79 661 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 ASAH2Q9NR71 780 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 ANO10Q9NW15 660 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 TMEM63CQ9P1W3 806 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 CEP72Q9P209 647 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 MAGEC2Q9UBF1 373 aaPredicted RBP9.36□□□□□ -0.91
SNX4-205ENST00000482965 COQ4Q9Y3A0 265 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 MRPS23Q9Y3D9 190 aaKnown RBP9.36□□□□□ -0.91
SNX4-205ENST00000482965 ASB3Q9Y575 518 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 NME7Q9Y5B8 376 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.36□□□□□ -0.91
SNX4-205ENST00000482965 UNC80Q8N2C7 3258 aa9.36□□□□□ -0.91
SNX4-205ENST00000482965 ZNF638Q14966 1978 aaKnown RBP9.35□□□□□ -0.91
SNX4-205ENST00000482965 GREB1Q4ZG55 1949 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 DENND4CQ5VZ89 1909 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 ZNF197O14709 1029 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 P4HA2O15460 535 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 AFPP02771 609 aaKnown RBP9.35□□□□□ -0.91
SNX4-205ENST00000482965 MYL4P12829 197 aa9.35□□□□□ -0.91
SNX4-205ENST00000482965 ATF6P18850 670 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms