RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 C9orf72Q96LT7 481 aa19.02■□□□□ 0.63
SSR4-209ENST00000482902 HAPLN2Q9GZV7 340 aa19.02■□□□□ 0.63
SSR4-209ENST00000482902 ZCWPW1Q9H0M4 648 aa19.02■□□□□ 0.63
SSR4-209ENST00000482902 GINM1Q9NU53 330 aa19.02■□□□□ 0.63
SSR4-209ENST00000482902 RBAKQ9NYW8 714 aaPredicted RBP19.02■□□□□ 0.63
SSR4-209ENST00000482902 LNPEPQ9UIQ6 1025 aa19.02■□□□□ 0.63
SSR4-209ENST00000482902 TLR3O15455 904 aaKnown RBP19.01■□□□□ 0.63
SSR4-209ENST00000482902 SPAG7O75391 227 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 EGFRP00533 1210 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 ABCD1P33897 745 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 TNFAIP1Q13829 316 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 TAF1BQ53T94 588 aaPredicted RBP19.01■□□□□ 0.63
SSR4-209ENST00000482902 SNX30Q5VWJ9 437 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 PLEKHA7Q6IQ23 1121 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 GSTA5Q7RTV2 222 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 EXD1Q8NHP7 514 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 ZBTB45Q96K62 511 aaPredicted RBP19.01■□□□□ 0.63
SSR4-209ENST00000482902 STYXL1Q9Y6J8 313 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 SCINQ9Y6U3 715 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 NFASCO94856 1347 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 ZNF541Q9H0D2 1346 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 CUL3Q13618 768 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 XKR3Q5GH77 459 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 ZBTB41Q5SVQ8 909 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 PHF13Q86YI8 300 aaPredicted RBP19.01■□□□□ 0.63
SSR4-209ENST00000482902 B4GALNT2Q8NHY0 566 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 VCPIP1Q96JH7 1222 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 FGD4Q96M96 766 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 KLHL11Q9NVR0 708 aa19.01■□□□□ 0.63
SSR4-209ENST00000482902 RGPD3A6NKT7 1758 aaPredicted RBP19■□□□□ 0.63
SSR4-209ENST00000482902 RGPD4Q7Z3J3 1758 aa19■□□□□ 0.63
SSR4-209ENST00000482902 GSTTP1A0A1W2PQM5 241 aa19■□□□□ 0.63
SSR4-209ENST00000482902 DPEP1P16444 411 aa19■□□□□ 0.63
SSR4-209ENST00000482902 STAT4Q14765 748 aa19■□□□□ 0.63
SSR4-209ENST00000482902 PDK4Q16654 411 aa19■□□□□ 0.63
SSR4-209ENST00000482902 CIAPIN1Q6FI81 312 aa19■□□□□ 0.63
SSR4-209ENST00000482902 DSTYKQ6XUX3 929 aa19■□□□□ 0.63
SSR4-209ENST00000482902 TRABD2AQ86V40 505 aa19■□□□□ 0.63
SSR4-209ENST00000482902 CCDC77Q9BR77 488 aa19■□□□□ 0.63
SSR4-209ENST00000482902 NUMBLQ9Y6R0 609 aa19■□□□□ 0.63
SSR4-209ENST00000482902 KLRC2P26717 231 aa19■□□□□ 0.63
SSR4-209ENST00000482902 RCN1Q15293 331 aa19■□□□□ 0.63
SSR4-209ENST00000482902 CTC1Q2NKJ3 1217 aa19■□□□□ 0.63
SSR4-209ENST00000482902 ARHGAP22Q7Z5H3 698 aa19■□□□□ 0.63
SSR4-209ENST00000482902 CCDC125Q86Z20 511 aa19■□□□□ 0.63
SSR4-209ENST00000482902 REPS2Q8NFH8 660 aa19■□□□□ 0.63
SSR4-209ENST00000482902 SCG3Q8WXD2 468 aaKnown RBP19■□□□□ 0.63
SSR4-209ENST00000482902 CDHR1Q96JP9 859 aa19■□□□□ 0.63
SSR4-209ENST00000482902 VPS33BQ9H267 617 aa19■□□□□ 0.63
SSR4-209ENST00000482902 CYLDQ9NQC7 956 aa19■□□□□ 0.63
SSR4-209ENST00000482902 ANKFY1Q9P2R3 1169 aa19■□□□□ 0.63
SSR4-209ENST00000482902 LRRIQ4A6NIV6 560 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 SKIP12755 728 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 KCNA3P22001 575 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 C1QBPQ07021 282 aaKnown RBP18.99■□□□□ 0.63
SSR4-209ENST00000482902 SPARCL1Q14515 664 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 CCDC6Q16204 474 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 P3H1Q32P28 736 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 SLC45A4Q5BKX6 768 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 DEPTORQ8TB45 409 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 FEZF2Q8TBJ5 459 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 CADM1Q9BY67 442 aaKnown RBP18.99■□□□□ 0.63
SSR4-209ENST00000482902 STK32BQ9NY57 414 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 NUB1Q9Y5A7 615 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 PI4K2BG5E9Z4 385 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 PRPF4O43172 522 aaKnown RBP eCLIP18.99■□□□□ 0.63
SSR4-209ENST00000482902 KRT36O76013 467 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 TJP3O95049 919 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 SUPT20HL2P0C7V6 817 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 CACNA2D1P54289 1103 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 BACE1P56817 501 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 NOP14P78316 857 aaKnown RBP18.99■□□□□ 0.63
SSR4-209ENST00000482902 NFX1Q12986 1120 aaKnown RBP18.99■□□□□ 0.63
SSR4-209ENST00000482902 SUPT20HL1Q3ZLR7 823 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 ATP13A4Q4VNC1 1196 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 ZFYVE27Q5T4F4 411 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 KAZNQ674X7 775 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 CYP4F22Q6NT55 531 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 RELL1Q8IUW5 271 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 RBM15Q96T37 977 aaKnown RBP eCLIP18.99■□□□□ 0.63
SSR4-209ENST00000482902 MSTO1Q9BUK6 570 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 TARS2Q9BW92 718 aaKnown RBP18.99■□□□□ 0.63
SSR4-209ENST00000482902 SAR1AQ9NR31 198 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 PARVAQ9NVD7 372 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 ZFP69BQ9UJL9 534 aa18.99■□□□□ 0.63
SSR4-209ENST00000482902 FER1L6Q2WGJ9 1857 aa18.98■□□□□ 0.63
SSR4-209ENST00000482902 K7ERI5 159 aa18.98■□□□□ 0.63
SSR4-209ENST00000482902 PYGLP06737 847 aa18.98■□□□□ 0.63
SSR4-209ENST00000482902 KRT10P13645 584 aa18.98■□□□□ 0.63
SSR4-209ENST00000482902 GLRA2P23416 452 aa18.98■□□□□ 0.63
SSR4-209ENST00000482902 TBXAS1P24557 533 aaPredicted RBP18.98■□□□□ 0.63
SSR4-209ENST00000482902 GCAP28676 217 aa18.98■□□□□ 0.63
SSR4-209ENST00000482902 CETN2P41208 172 aa18.98■□□□□ 0.63
SSR4-209ENST00000482902 MAGEA4P43358 317 aa18.98■□□□□ 0.63
SSR4-209ENST00000482902 SLFN12LQ6IEE8 588 aa18.98■□□□□ 0.63
SSR4-209ENST00000482902 NLRP9Q7RTR0 991 aa18.98■□□□□ 0.63
SSR4-209ENST00000482902 RIBC1Q8N443 379 aaPredicted RBP18.98■□□□□ 0.63
SSR4-209ENST00000482902 ZCCHC9Q8N567 271 aaKnown RBP18.98■□□□□ 0.63
SSR4-209ENST00000482902 OR5B17Q8NGF7 314 aa18.98■□□□□ 0.63
SSR4-209ENST00000482902 GATA6Q92908 595 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms