RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 NME7Q9Y5B8 376 aa15.29■□□□□ 0.04
CHD3-211ENST00000481999 ZNF236Q9UL36 1845 aa15.29■□□□□ 0.04
CHD3-211ENST00000481999 PI4K2BG5E9Z4 385 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 FAM107AO95990 144 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 DARSP14868 501 aaKnown RBP15.28■□□□□ 0.04
CHD3-211ENST00000481999 PURAQ00577 322 aaKnown RBP15.28■□□□□ 0.04
CHD3-211ENST00000481999 SNX17Q15036 470 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 FAM182AQ5T1J6 154 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 SEL1L2Q5TEA6 688 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 PLEKHA7Q6IQ23 1121 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 ZNF410Q86VK4 478 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 SESTD1Q86VW0 696 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 EMC1Q8N766 993 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 MYCBPAPQ8TBZ2 947 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 HHIPL1Q96JK4 782 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 CPXM1Q96SM3 734 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 TXLNGYQ9BZA5 131 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 GCOM2Q9BZD3 368 aaPredicted RBP15.28■□□□□ 0.04
CHD3-211ENST00000481999 ZFYVE28Q9HCC9 887 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 AVENQ9NQS1 362 aaPredicted RBP15.28■□□□□ 0.04
CHD3-211ENST00000481999 PHF2O75151 1096 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 RECQL4O94761 1208 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 EIF4BP23588 611 aaKnown RBP15.28■□□□□ 0.04
CHD3-211ENST00000481999 CHRNA3P32297 505 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 GBP1P32455 592 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 RWDD2BP57060 319 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 KRT71Q3SY84 523 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 ODF2Q5BJF6 829 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 GNASQ5JWF2 1037 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 PACS2Q86VP3 889 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 SLC13A5Q86YT5 568 aaPredicted RBP15.28■□□□□ 0.04
CHD3-211ENST00000481999 JAMLQ86YT9 394 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 MICALL1Q8N3F8 863 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 MAGOHBQ96A72 148 aaKnown RBP15.28■□□□□ 0.04
CHD3-211ENST00000481999 DDX27Q96GQ7 796 aaKnown RBP15.28■□□□□ 0.04
CHD3-211ENST00000481999 PIWIL1Q96J94 861 aaKnown RBP15.28■□□□□ 0.04
CHD3-211ENST00000481999 ZDHHC18Q9NUE0 388 aa15.28■□□□□ 0.04
CHD3-211ENST00000481999 BCCIPQ9P287 314 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHD3-211ENST00000481999 R3HDM2Q9Y2K5 976 aaKnown RBP15.28■□□□□ 0.04
CHD3-211ENST00000481999 CILPO75339 1184 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 CTSHP09668 335 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 CYP3A5P20815 502 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 FLT3LGP49771 235 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 NDST1P52848 882 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 SEC24CP53992 1094 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 PPP2R2AP63151 447 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 IFFO1Q0D2I5 559 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 UBAP2Q5T6F2 1119 aaKnown RBP15.27■□□□□ 0.04
CHD3-211ENST00000481999 CCDC50Q8IVM0 306 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 C3orf20Q8ND61 904 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 TRIM6Q9C030 488 aaPredicted RBP15.27■□□□□ 0.04
CHD3-211ENST00000481999 AP5M1Q9H0R1 490 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 ASB7Q9H672 318 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 LRRC4CQ9HCJ2 640 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 CHST7Q9NS84 486 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 GGA2Q9UJY4 613 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 ATP8A1Q9Y2Q0 1164 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 SNX9Q9Y5X1 595 aa15.27■□□□□ 0.04
CHD3-211ENST00000481999 RRN3P2A6NIE6 340 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 E7EVH7 732 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 HAS3O00219 553 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 AOC2O75106 756 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 PROSCO94903 275 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 LIG3P49916 1009 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 CPT1AP50416 773 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 PRKCZQ05513 592 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 CCDC142Q17RM4 750 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 ZNF618Q5T7W0 954 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 LIN9Q5TKA1 542 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 SLC27A1Q6PCB7 646 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 CCDC137Q6PK04 289 aaKnown RBP15.27■□□□□ 0.03
CHD3-211ENST00000481999 YTHDF3Q7Z739 585 aaKnown RBP15.27■□□□□ 0.03
CHD3-211ENST00000481999 PRUNE1Q86TP1 453 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 ARRDC4Q8NCT1 418 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 JOSD2Q8TAC2 188 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 RNF25Q96BH1 459 aaPredicted RBP15.27■□□□□ 0.03
CHD3-211ENST00000481999 MRPL45Q9BRJ2 306 aaKnown RBP15.27■□□□□ 0.03
CHD3-211ENST00000481999 SNX24Q9Y343 169 aa15.27■□□□□ 0.03
CHD3-211ENST00000481999 SMIM35A0A1B0GVV1 85 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 TCRBV5S1A1TA0A578 114 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 GRM5P41594 1212 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 AFF1P51825 1210 aaKnown RBP15.26■□□□□ 0.03
CHD3-211ENST00000481999 PTPN11Q06124 597 aaPredicted RBP15.26■□□□□ 0.03
CHD3-211ENST00000481999 RAB6CQ53S08 254 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 HOOK3Q86VS8 718 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 OTUD6BQ8N6M0 293 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 C7orf31Q8N865 590 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 FEZF2Q8TBJ5 459 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 CAPNS2Q96L46 248 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 HEXIM2Q96MH2 286 aaKnown RBP15.26■□□□□ 0.03
CHD3-211ENST00000481999 RAB6CQ9H0N0 254 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 FAM49BQ9NUQ9 324 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 NOVA2Q9UNW9 492 aaKnown RBP15.26■□□□□ 0.03
CHD3-211ENST00000481999 PODXLO00592 558 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 IGHA2P01877 340 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 ERBB2P04626 1255 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 MYBL1P10243 752 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 RALAP11233 206 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 KRT10P13645 584 aa15.26■□□□□ 0.03
CHD3-211ENST00000481999 ELNP15502 786 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms