RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 VNN2O95498 520 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 DLATP10515 647 aaKnown RBP12.27□□□□□ -0.45
CCM2-213ENST00000480658 ANXA13P27216 316 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 SYKP43405 635 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 PPP3CCP48454 512 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 ENPEPQ07075 957 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 CYP24A1Q07973 514 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 GPR158Q5T848 1215 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 FOXD4L5Q5VV16 416 aaPredicted RBP12.27□□□□□ -0.45
CCM2-213ENST00000480658 VITQ6UXI7 678 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 RALGPS2Q86X27 583 aaPredicted RBP12.27□□□□□ -0.45
CCM2-213ENST00000480658 CBWD2Q8IUF1 395 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 SLC9A9Q8IVB4 645 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 HS6ST3Q8IZP7 471 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 FOXD4L4Q8WXT5 416 aaPredicted RBP12.27□□□□□ -0.45
CCM2-213ENST00000480658 SECISBP2LQ93073 1101 aaKnown RBP12.27□□□□□ -0.45
CCM2-213ENST00000480658 CLDN23Q96B33 292 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 CRISPLD1Q9H336 500 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 SPATA6Q9NWH7 488 aaPredicted RBP12.27□□□□□ -0.45
CCM2-213ENST00000480658 FRMD4BQ9Y2L6 1034 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 PCDHGA2Q9Y5H1 932 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 PIAS3Q9Y6X2 628 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 ATP8B3O60423 1300 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 TCHHQ07283 1943 aa12.27□□□□□ -0.45
CCM2-213ENST00000480658 MYO10Q9HD67 2058 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 NUP210Q8TEM1 1887 aaPredicted RBP12.26□□□□□ -0.45
CCM2-213ENST00000480658 A0A1W2PQ27 194 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 A0A1W2PQ64 194 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 A0A1W2PQD8 194 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 PRR23AA6NEV1 266 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 PDXKO00764 312 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 TGFB1I1O43294 461 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 CALUO43852 315 aaPredicted RBP12.26□□□□□ -0.45
CCM2-213ENST00000480658 KINO60870 393 aaKnown RBP12.26□□□□□ -0.45
CCM2-213ENST00000480658 MOSPD3O75425 235 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 DCNP07585 359 aaKnown RBP12.26□□□□□ -0.45
CCM2-213ENST00000480658 PFKFB1P16118 471 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 ATF6P18850 670 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 WARSP23381 471 aaKnown RBP12.26□□□□□ -0.45
CCM2-213ENST00000480658 AFMP43652 599 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 CCR3P51677 355 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 ZNF268Q14587 947 aaPredicted RBP12.26□□□□□ -0.45
CCM2-213ENST00000480658 FOXD4L6Q3SYB3 417 aaPredicted RBP12.26□□□□□ -0.45
CCM2-213ENST00000480658 CC2D1AQ6P1N0 951 aaPredicted RBP12.26□□□□□ -0.45
CCM2-213ENST00000480658 FOXD4L3Q6VB84 417 aaPredicted RBP12.26□□□□□ -0.45
CCM2-213ENST00000480658 GAREM2Q75VX8 874 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 TRAPPC11Q7Z392 1133 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 ARID3BQ8IVW6 561 aaPredicted RBP12.26□□□□□ -0.45
CCM2-213ENST00000480658 SYNPOQ8N3V7 929 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 KIAA1958Q8N8K9 716 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 CCDC26Q8TAB7 109 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 CXorf38Q8TB03 319 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 BPIFB1Q8TDL5 484 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 FAM3CQ92520 227 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 PAGE5Q96GU1 130 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 SPATA17Q96L03 361 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 MYRFLQ96LU7 910 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 MMS19Q96T76 1030 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 FGFBP2Q9BYJ0 223 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 FOXQ1Q9C009 403 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 ELOVL4Q9GZR5 314 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 SNX25Q9H3E2 840 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 VRTNQ9H8Y1 702 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 SLC39A2Q9NP94 309 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 HEBP1Q9NRV9 189 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 MAGEC2Q9UBF1 373 aaPredicted RBP12.26□□□□□ -0.45
CCM2-213ENST00000480658 HOOK1Q9UJC3 728 aaKnown RBP12.26□□□□□ -0.45
CCM2-213ENST00000480658 GTF3C3Q9Y5Q9 886 aa12.26□□□□□ -0.45
CCM2-213ENST00000480658 FAM237AA0A1B0GTK4 181 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 MAPK13O15264 365 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 ACTN4O43707 911 aaKnown RBP12.25□□□□□ -0.45
CCM2-213ENST00000480658 PHACTR2O75167 634 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 NOL4O94818 638 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 LMNAP02545 664 aaKnown RBP12.25□□□□□ -0.45
CCM2-213ENST00000480658 RPL13P26373 211 aaKnown RBP12.25□□□□□ -0.45
CCM2-213ENST00000480658 CYP2J2P51589 502 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 KPNA1P52294 538 aaPredicted RBP12.25□□□□□ -0.45
CCM2-213ENST00000480658 CUL4BQ13620 913 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 GRM2Q14416 872 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 SOWAHAQ2M3V2 549 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 DGKKQ5KSL6 1271 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 LIMS2Q7Z4I7 341 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 NELFCDQ8IXH7 590 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 CMTM8Q8IZV2 173 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 TAF4BQ92750 862 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 TNIP3Q96KP6 325 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 TMEM209Q96SK2 561 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 LPIN3Q9BQK8 851 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 SYT15Q9BQS2 421 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 IMPG2Q9BZV3 1241 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 BLZF1Q9H2G9 400 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 IKZF4Q9H2S9 585 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 FAM86C1Q9NVL1 165 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 RMND1Q9NWS8 449 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 SIX4Q9UIU6 781 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 HPSEQ9Y251 543 aa12.25□□□□□ -0.45
CCM2-213ENST00000480658 GOLGA6L4A6NEF3 574 aa12.24□□□□□ -0.45
CCM2-213ENST00000480658 IKBKBO14920 756 aa12.24□□□□□ -0.45
CCM2-213ENST00000480658 CLSTN1O94985 981 aa12.24□□□□□ -0.45
CCM2-213ENST00000480658 RPN1P04843 607 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms