RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 C12orf29Q8N999 325 aa14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 B3GALNT2Q8NCR0 500 aa14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 PABPC5Q96DU9 382 aaKnown RBP14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 KREMEN1Q96MU8 473 aa14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 SEPT5Q99719 369 aaPredicted RBP14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 OXCT2Q9BYC2 517 aaPredicted RBP14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 CRISPLD1Q9H336 500 aa14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 SIX2Q9NPC8 291 aa14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 FAM49BQ9NUQ9 324 aa14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 IFNKQ9P0W0 207 aa14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 CDH22Q9UJ99 828 aa14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 AJAP1Q9UKB5 411 aaPredicted RBP14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 PCDHB4Q9Y5E5 795 aa14.36□□□□□ -0.11
SNRNP200-204ENST00000480615 MTMR11A4FU01 709 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 CILPO75339 1184 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 ABLIM3O94929 683 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 CALCAP01258 141 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 C8AP07357 584 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 KRT5P13647 590 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 ATF2P15336 505 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 LTBRP36941 435 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 USP8P40818 1118 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 UBASH3AP57075 661 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 INCA1Q0VD86 236 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 RAPGEF1Q13905 1077 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 KCNC3Q14003 757 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 CTC1Q2NKJ3 1217 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 RARS2Q5T160 578 aaKnown RBP14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 TMEM270Q6UE05 265 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 TMC5Q6UXY8 1006 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 SPATA2LQ8IUW3 424 aaPredicted RBP14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 GPIHBP1Q8IV16 184 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 SPATA18Q8TC71 538 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 WHAMMQ8TF30 809 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 CASP10Q92851 521 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 MYLPFQ96A32 169 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 NT5C1AQ9BXI3 368 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 ELOVL4Q9GZR5 314 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 UBE2ZQ9H832 354 aaPredicted RBP14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 CLEC1BQ9P126 229 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 AFF4Q9UHB7 1163 aaKnown RBP14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 FBXW11Q9UKB1 542 aa14.35□□□□□ -0.11
SNRNP200-204ENST00000480615 MYH10P35580 1976 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 A0A1B0GTH6 734 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 CLDN5O00501 218 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 AP5Z1O43299 807 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 PNMA6AP0CW24 399 aaPredicted RBP14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 CCDC130P13994 396 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 CYP2F1P24903 491 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 MFAP3P55082 362 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 GCNT1Q02742 428 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 TFF2Q03403 129 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 MGAT5BQ3V5L5 792 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 TPGS2Q68CL5 300 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 IQCEQ6IPM2 695 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 HLA-CQ95604 372 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 PCED1BQ96HM7 432 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 TNIP3Q96KP6 325 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 HEXIM2Q96MH2 286 aaKnown RBP14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 PKMYT1Q99640 499 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 MED10Q9BTT4 135 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 XPO4Q9C0E2 1151 aaKnown RBP14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 DNAJC12Q9UKB3 198 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 PCDHB5Q9Y5E4 795 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 FHOD1Q9Y613 1164 aa14.34□□□□□ -0.11
SNRNP200-204ENST00000480615 CCDC195A0A1B0GUA6 201 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 FSD2A1L4K1 749 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 GOLGA6L3A6NEY3 463 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 EPHB6O15197 1021 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 CCL16O15467 120 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 NCK2O43639 380 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 BDNFP23560 247 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 RAD23BP54727 409 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 YWHAEP62258 255 aaKnown RBP14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 PPM1LQ5SGD2 360 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 KLHDC7AQ5VTJ3 777 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 ANKRD54Q6NXT1 300 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 UNC93AQ86WB7 457 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 STKLD1Q8NE28 680 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 MYCBPAPQ8TBZ2 947 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 GPR152Q8TDT2 470 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 PLEKHA4Q9H4M7 779 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 SIK3Q9Y2K2 1263 aa14.33□□□□□ -0.11
SNRNP200-204ENST00000480615 FAM163BP0C2L3 166 aa14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 CD19P15391 556 aa14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 ACO1P21399 889 aaKnown RBP14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 ADORA2BP29275 332 aa14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 SSTR3P32745 418 aaPredicted RBP14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 GPR15P49685 360 aa14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 POLR2FP61218 127 aaKnown RBP14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 TWF1Q12792 350 aa14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 NFE2Q16621 373 aaPredicted RBP14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 SDHAF4Q5VUM1 108 aa14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 DPY19L2P1Q6NXN4 242 aa14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 FAM171BQ6P995 826 aa14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 ELMSAN1Q6PJG2 1045 aa14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 CCDC149Q6ZUS6 474 aa14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 SCN4BQ8IWT1 228 aa14.33□□□□□ -0.12
SNRNP200-204ENST00000480615 SLC4A11Q8NBS3 891 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms