RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 DHX40Q8IX18 779 aaKnown RBP16.16■□□□□ 0.18
ABCF3-213ENST00000480539 B3GALNT2Q8NCR0 500 aa16.16■□□□□ 0.18
ABCF3-213ENST00000480539 CMASQ8NFW8 434 aaPredicted RBP16.16■□□□□ 0.18
ABCF3-213ENST00000480539 SUSD6Q92537 303 aa16.16■□□□□ 0.18
ABCF3-213ENST00000480539 NT5C1BQ96P26 610 aa16.16■□□□□ 0.18
ABCF3-213ENST00000480539 CRACR2AQ9BSW2 395 aa16.16■□□□□ 0.18
ABCF3-213ENST00000480539 PRKD2Q9BZL6 878 aa16.16■□□□□ 0.18
ABCF3-213ENST00000480539 PIDD1Q9HB75 910 aa16.16■□□□□ 0.18
ABCF3-213ENST00000480539 PCDHB5Q9Y5E4 795 aa16.16■□□□□ 0.18
ABCF3-213ENST00000480539 MTCL1Q9Y4B5 1905 aaKnown RBP16.15■□□□□ 0.18
ABCF3-213ENST00000480539 XYLBO75191 536 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 HNRNPA1P09651 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
ABCF3-213ENST00000480539 SP100P23497 879 aaPredicted RBP16.15■□□□□ 0.18
ABCF3-213ENST00000480539 ZNF165P49910 485 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 CYP27A1Q02318 531 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 INCA1Q0VD86 236 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 CUL2Q13617 745 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 CBX2Q14781 532 aaPredicted RBP16.15■□□□□ 0.18
ABCF3-213ENST00000480539 KRT31Q15323 416 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 SMAD2Q15796 467 aaKnown RBP16.15■□□□□ 0.18
ABCF3-213ENST00000480539 UVSSAQ2YD98 709 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 PUS10Q3MIT2 529 aaKnown RBP16.15■□□□□ 0.18
ABCF3-213ENST00000480539 MGAT5BQ3V5L5 792 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 DENND4AQ7Z401 1863 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 ACOT1Q86TX2 421 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 SPATA2LQ8IUW3 424 aaPredicted RBP16.15■□□□□ 0.18
ABCF3-213ENST00000480539 ARHGEF19Q8IW93 802 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 LMO3Q8TAP4 145 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 SPPL2BQ8TCT7 592 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 RIPOR3Q96MK2 946 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 TWNKQ96RR1 684 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 BPIFA3Q9BQP9 254 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 NDST4Q9H3R1 872 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 POMKQ9H5K3 350 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 CYP3A43Q9HB55 503 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 HCFC1R1Q9NWW0 138 aa16.15■□□□□ 0.18
ABCF3-213ENST00000480539 FAM163BP0C2L3 166 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 PTPN1P18031 435 aaKnown RBP16.14■□□□□ 0.17
ABCF3-213ENST00000480539 MTHFRP42898 656 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 GPR15P49685 360 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 NTHL1P78549 312 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 APBA1Q02410 837 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 SMARCB1Q12824 385 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 NFE2Q16621 373 aaPredicted RBP16.14■□□□□ 0.17
ABCF3-213ENST00000480539 VWA3BQ502W6 1294 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 TJAP1Q5JTD0 557 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 GBP6Q6ZN66 633 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 PPM1KQ8N3J5 372 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 STKLD1Q8NE28 680 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 C2orf15Q8WU43 125 aaKnown RBP16.14■□□□□ 0.17
ABCF3-213ENST00000480539 KAT5Q92993 513 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 PCED1BQ96HM7 432 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 HSD3B7Q9H2F3 369 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 CISHQ9NSE2 258 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 MAFFQ9ULX9 164 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 FAM50BQ9Y247 325 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 CLUHO75153 1309 aa16.14■□□□□ 0.17
ABCF3-213ENST00000480539 CILPO75339 1184 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 CCDC130P13994 396 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 ZNF18P17022 549 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 ATF6P18850 670 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 CYP2F1P24903 491 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 EXOC3L4Q17RC7 722 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 ZNF394Q53GI3 561 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 FAM171BQ6P995 826 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 C4orf50Q6ZRC1 276 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 RRAGAQ7L523 313 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 GRASPQ7Z6J2 395 aaPredicted RBP16.13■□□□□ 0.17
ABCF3-213ENST00000480539 EHBP1Q8NDI1 1231 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 MYCBPAPQ8TBZ2 947 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 WHAMMQ8TF30 809 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 TNIP3Q96KP6 325 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 VPS16Q9H269 839 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 CBX8Q9HC52 389 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 FAM49BQ9NUQ9 324 aa16.13■□□□□ 0.17
ABCF3-213ENST00000480539 SMTNL1A8MU46 457 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 BECN2A8MW95 431 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 CLDN5O00501 218 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 PAPLNO95428 1278 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 POU2F2P09086 479 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 HAPLN1P10915 354 aaPredicted RBP16.12■□□□□ 0.17
ABCF3-213ENST00000480539 BMP1P13497 986 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 ATP1A3P13637 1013 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 SLC9A1P19634 815 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 BDNFP23560 247 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 TBXAS1P24557 533 aaPredicted RBP16.12■□□□□ 0.17
ABCF3-213ENST00000480539 ALDH1A3P47895 512 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 COPB1P53618 953 aaKnown RBP16.12■□□□□ 0.17
ABCF3-213ENST00000480539 PLD1Q13393 1074 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 IQCB1Q15051 598 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 MAPRE1Q15691 268 aaKnown RBP16.12■□□□□ 0.17
ABCF3-213ENST00000480539 CFAP221Q4G0U5 840 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 ATAT1Q5SQI0 421 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 SDHAF4Q5VUM1 108 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 GJB7Q6PEY0 223 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 TRIM65Q6PJ69 517 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 RTL10Q7L3V2 364 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 GET4Q7L5D6 327 aaPredicted RBP16.12■□□□□ 0.17
ABCF3-213ENST00000480539 FAM35AQ86V20 835 aa16.12■□□□□ 0.17
ABCF3-213ENST00000480539 UNC93AQ86WB7 457 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms