RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 LHX5Q9H2C1 402 aa15.41■□□□□ 0.06
PKNOX1-206ENST00000480179 SYNCQ9H7C4 482 aa15.41■□□□□ 0.06
PKNOX1-206ENST00000480179 HMX1Q9NP08 348 aaPredicted RBP15.41■□□□□ 0.06
PKNOX1-206ENST00000480179 TJP2Q9UDY2 1190 aa15.41■□□□□ 0.06
PKNOX1-206ENST00000480179 IP6K2Q9UHH9 426 aa15.41■□□□□ 0.06
PKNOX1-206ENST00000480179 HPCAL4Q9UM19 191 aa15.41■□□□□ 0.06
PKNOX1-206ENST00000480179 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.41■□□□□ 0.06
PKNOX1-206ENST00000480179 SMIM28A0A1B0GU29 152 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 TCRBV5S1A1TA0A578 114 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 TMEM191CA6NGB0 347 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 O00370 1275 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 PHF2O75151 1096 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 VDRP11473 427 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 OAS2P29728 719 aaKnown RBP15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 RSPH3Q86UC2 560 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 PRELID2Q8N945 189 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 SMG8Q8ND04 991 aaKnown RBP15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 PAWRQ96IZ0 340 aaKnown RBP15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 NT5C1AQ9BXI3 368 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 ACBD3Q9H3P7 528 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 H3BQF6 201 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 PSTPIP1O43586 416 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 ASGR1P07306 291 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 CYP3A5P20815 502 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 MAN1A1P33908 653 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 PSMC1P62191 440 aaKnown RBP15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 DR1Q01658 176 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 OGDHQ02218 1023 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 ZNF252P-AS1Q0IIN9 211 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 HLTFQ14527 1009 aaKnown RBP eCLIP15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 KCNA10Q16322 511 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 EMBQ6PCB8 327 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 MAATS1Q7Z4T9 603 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 DDX42Q86XP3 938 aaKnown RBP eCLIP15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 CCDC50Q8IVM0 306 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 RHOT1Q8IXI2 618 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 ZDHHC14Q8IZN3 488 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 TTC39CQ8N584 583 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 LRRC52Q8N7C0 313 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 ANKLE1Q8NAG6 615 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 ARRDC4Q8NCT1 418 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 C3orf20Q8ND61 904 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 UBA3Q8TBC4 463 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 C18orf8Q96DM3 657 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 DDX27Q96GQ7 796 aaKnown RBP15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 CPXM1Q96SM3 734 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 PLVAPQ9BX97 442 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 KLHL11Q9NVR0 708 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 STRIP2Q9ULQ0 834 aa15.4■□□□□ 0.06
PKNOX1-206ENST00000480179 RPS6KA5O75582 802 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 CD4P01730 458 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 ERBB2P04626 1255 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 FAM153BP0C7A2 387 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 ATF7P17544 494 aaPredicted RBP15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 PPP2R5EQ16537 467 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 GOLGA7BQ2TAP0 167 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 FAM153CQ494X1 144 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 PPP1R15BQ5SWA1 713 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 SERINC5Q86VE9 423 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 CAVIN3Q969G5 261 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 MAGOHBQ96A72 148 aaKnown RBP15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 UBXN6Q9BZV1 441 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 SENP6Q9GZR1 1112 aaPredicted RBP15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 DPH5Q9H2P9 285 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 GOLGA2P5Q9HBQ8 144 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 FAM153AQ9UHL3 310 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 MTUS1Q9ULD2 1270 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 ST3GAL5Q9UNP4 418 aa15.39■□□□□ 0.05
PKNOX1-206ENST00000480179 POLR3GO15318 223 aaPredicted RBP15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 XPOTO43592 962 aaKnown RBP15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 CHRNA1P02708 482 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 RARAP10276 462 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 KCNE1P15382 129 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 TCF4P15884 667 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 FAM193AP78312 1265 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 NKX3-2P78367 333 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 TAP1Q03518 808 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 SOX4Q06945 474 aaPredicted RBP15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 NFX1Q12986 1120 aaKnown RBP15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 GPS2Q13227 327 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 PDCLQ13371 301 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 CUL1Q13616 776 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 CNGA2Q16280 664 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 ACOT1Q86TX2 421 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 ZNF560Q96MR9 790 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 TRIM31Q9BZY9 425 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 VIPAS39Q9H9C1 493 aa15.38■□□□□ 0.05
PKNOX1-206ENST00000480179 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.38■□□□□ 0.055e-8■■■■■ 30.4
PKNOX1-206ENST00000480179 A0A1W2PPC1 479 aa15.37■□□□□ 0.05
PKNOX1-206ENST00000480179 BHMG1C9JSJ3 638 aaPredicted RBP15.37■□□□□ 0.05
PKNOX1-206ENST00000480179 DAPK3O43293 454 aa15.37■□□□□ 0.05
PKNOX1-206ENST00000480179 CHRNA3P32297 505 aa15.37■□□□□ 0.05
PKNOX1-206ENST00000480179 THPOP40225 353 aa15.37■□□□□ 0.05
PKNOX1-206ENST00000480179 NNTQ13423 1086 aa15.37■□□□□ 0.05
PKNOX1-206ENST00000480179 SIX1Q15475 284 aaPredicted RBP15.37■□□□□ 0.05
PKNOX1-206ENST00000480179 XKR4Q5GH76 650 aa15.37■□□□□ 0.05
PKNOX1-206ENST00000480179 FBXO47Q5MNV8 452 aa15.37■□□□□ 0.05
PKNOX1-206ENST00000480179 TTC27Q6P3X3 843 aa15.37■□□□□ 0.05
PKNOX1-206ENST00000480179 XYLT1Q86Y38 959 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms