RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SAMD4BQ5PRF9 694 aaKnown RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 DENND1BQ6P3S1 775 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 ARHGAP22Q7Z5H3 698 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 SP8Q8IXZ3 490 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 ZNF34Q8IZ26 560 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 SVOPQ8N4V2 548 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 TBC1D19Q8N5T2 526 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 AADATQ8N5Z0 425 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 SKA2Q8WVK7 121 aaPredicted RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 REEP2Q9BRK0 252 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 THAP1Q9NVV9 213 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 CDV3Q9UKY7 258 aaKnown RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 CLEC11AQ9Y240 323 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 LAMC1P11047 1609 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 C19orf81C9J6K1 198 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L10C9JJH3 530 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 ABCB1P08183 1280 aaPredicted RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 MAPK1P28482 360 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 PTGER2P43116 358 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 BAG6P46379 1132 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 ITGA1P56199 1179 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 RAB14P61106 215 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 POU5F1BQ06416 359 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 TTLL4Q14679 1199 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 PTPN21Q16825 1174 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 C6orf10Q5SRN2 563 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 MRNIPQ6NTE8 343 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 ZNF746Q6NUN9 644 aaPredicted RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 ARCQ7LC44 396 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 FBXO33Q7Z6M2 555 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 CLEC4FQ8N1N0 589 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 PROCA1Q8NCQ7 364 aaPredicted RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 SLC13A1Q9BZW2 595 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 DHX33Q9H6R0 707 aaKnown RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 ZNF302Q9NR11 478 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 DDX20Q9UHI6 824 aaKnown RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 EFR3BQ9Y2G0 817 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 CYP2D7A0A087X1C5 515 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 GPR75-ASB3A0A0A6YYF3 556 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 TRIM13O60858 407 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 ATP6V1E1P36543 226 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 ETFBP38117 255 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 RNF43Q68DV7 783 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 C16orf86Q6ZW13 317 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 ERO1BQ86YB8 467 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 C19orf60Q96EN9 201 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 RMND5BQ96G75 393 aaPredicted RBP6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 BTBD10Q9BSF8 475 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 NT5C1AQ9BXI3 368 aa6.4□□□□□ -1.38
PRPF4B-205ENST00000480058 DNAJC6O75061 913 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 MED26O95402 600 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 CYP19A1P11511 503 aaPredicted RBP6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 ME2P23368 584 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 RPL22P35268 128 aaKnown RBP6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC26A2P50443 739 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 RFX4Q33E94 735 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 NCAPG2Q86XI2 1143 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 TAGAPQ8N103 731 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 TTC16Q8NEE8 873 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 CASP10Q92851 521 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 PTPRN2Q92932 1015 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 IFT43Q96FT9 208 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 BDH2Q9BUT1 245 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 HMG20AQ9NP66 347 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 DLC1Q96QB1 1528 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 TBKBP1A7MCY6 615 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 PP2D1A8MPX8 630 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 HNRNPCL2B2RXH8 293 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 EXTL3O43909 919 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 GP5P40197 560 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 SERPINH1P50454 418 aaKnown RBP6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 VCPP55072 806 aaKnown RBP6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF844Q08AG5 666 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 METTL21CQ5VZV1 264 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 ZBTB49Q6ZSB9 765 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 DPP9Q86TI2 863 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 CREG2Q8IUH2 290 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 DCLK2Q8N568 766 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 CKAP2Q8WWK9 683 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 CNDP1Q96KN2 507 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 APOL6Q9BWW8 343 aa6.4□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF185O15231 689 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 HLA-DRAP01903 254 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 NNMTP40261 264 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 LLGL1Q15334 1064 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 KRT27Q7Z3Y8 459 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ZCCHC7Q8N3Z6 543 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 B4GALNT2Q8NHY0 566 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC38A7Q9NVC3 462 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ARHGEF38Q9NXL2 777 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 DNALI1O14645 258 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 VPS4BO75351 444 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 IREB2P48200 963 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ERVK-9P63128 1117 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF235Q14590 738 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SEL1L3Q68CR1 1132 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 LDHDQ86WU2 507 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 DDX42Q86XP3 938 aaKnown RBP eCLIP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 CAMK1DQ8IU85 385 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC22A9Q8IVM8 553 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms