RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 TUFMP49411 452 aaKnown RBP20.15■□□□□ 0.82
AGRN-208ENST00000479707 EPHB3P54753 998 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 SMARCB1Q12824 385 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 ORC1Q13415 861 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 NFE2Q16621 373 aaPredicted RBP20.15■□□□□ 0.82
AGRN-208ENST00000479707 PABPC1LQ4VXU2 614 aaKnown RBP20.15■□□□□ 0.82
AGRN-208ENST00000479707 MDH1BQ5I0G3 518 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 WDR44Q5JSH3 913 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 FAM171BQ6P995 826 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 SPATA2LQ8IUW3 424 aaPredicted RBP20.15■□□□□ 0.82
AGRN-208ENST00000479707 TRIM59Q8IWR1 403 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 HS6ST3Q8IZP7 471 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 FAM200AQ8TCP9 573 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 C2orf15Q8WU43 125 aaKnown RBP20.15■□□□□ 0.82
AGRN-208ENST00000479707 TATDN2Q93075 761 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 CNOT6LQ96LI5 555 aaKnown RBP20.15■□□□□ 0.82
AGRN-208ENST00000479707 N4BP1O75113 896 aaKnown RBP20.14■□□□□ 0.81
AGRN-208ENST00000479707 RHOP08100 348 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 POU2F2P09086 479 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 HAPLN1P10915 354 aaPredicted RBP20.14■□□□□ 0.81
AGRN-208ENST00000479707 PTPN1P18031 435 aaKnown RBP20.14■□□□□ 0.81
AGRN-208ENST00000479707 CYP2F1P24903 491 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 ERCC5P28715 1186 aaPredicted RBP20.14■□□□□ 0.81
AGRN-208ENST00000479707 GPR15P49685 360 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 CYP27A1Q02318 531 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 KCNH2Q12809 1159 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 LRMPQ12912 555 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 PLD1Q13393 1074 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 HSP90AA4PQ58FG1 418 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 IQCEQ6IPM2 695 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 TDRD5Q8NAT2 981 aaKnown RBP20.14■□□□□ 0.81
AGRN-208ENST00000479707 ITFG1Q8TB96 612 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 GPR152Q8TDT2 470 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 GIPC2Q8TF65 315 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 MYLPFQ96A32 169 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 ACSF2Q96CM8 615 aaPredicted RBP20.14■□□□□ 0.81
AGRN-208ENST00000479707 MYADMQ96S97 322 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 DNAJC25Q9H1X3 360 aa20.14■□□□□ 0.81
AGRN-208ENST00000479707 MAGEC2Q9UBF1 373 aaPredicted RBP20.14■□□□□ 0.81
AGRN-208ENST00000479707 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.14■□□□□ 0.81
AGRN-208ENST00000479707 TNFRSF10AO00220 468 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 MYL4P12829 197 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 CD58P19256 250 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 NDST1P52848 882 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 MARSP56192 900 aaKnown RBP20.13■□□□□ 0.81
AGRN-208ENST00000479707 SDHAF4Q5VUM1 108 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 OTOP3Q7RTS5 596 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 IRF2BP1Q8IU81 584 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 RNF135Q8IUD6 432 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 ING5Q8WYH8 240 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 NIF3L1Q9GZT8 377 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 HSFX1Q9UBD0 423 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 LIMD1Q9UGP4 676 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 COQ4Q9Y3A0 265 aa20.13■□□□□ 0.81
AGRN-208ENST00000479707 AFPP02771 609 aaKnown RBP20.12■□□□□ 0.81
AGRN-208ENST00000479707 ATF6P18850 670 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 BDNFP23560 247 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 MTIF2P46199 727 aaKnown RBP20.12■□□□□ 0.81
AGRN-208ENST00000479707 DDR2Q16832 855 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 SLC5A9Q2M3M2 681 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 C4orf50Q6ZRC1 276 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 C11orf57Q6ZUT1 292 aaPredicted RBP20.12■□□□□ 0.81
AGRN-208ENST00000479707 ACOT1Q86TX2 421 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 SCN4BQ8IWT1 228 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 B3GALNT2Q8NCR0 500 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 STKLD1Q8NE28 680 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 ST13P5Q8NFI4 369 aaPredicted RBP20.12■□□□□ 0.81
AGRN-208ENST00000479707 MYCBPAPQ8TBZ2 947 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 KHSRPQ92945 711 aaKnown RBP eCLIP20.12■□□□□ 0.81
AGRN-208ENST00000479707 TCEAL4Q96EI5 215 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 PCED1BQ96HM7 432 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 BCO2Q9BYV7 579 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 ANO10Q9NW15 660 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 HMGXB4Q9UGU5 601 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 USTQ9Y2C2 406 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 MRPS23Q9Y3D9 190 aaKnown RBP20.12■□□□□ 0.81
AGRN-208ENST00000479707 MYO10Q9HD67 2058 aa20.12■□□□□ 0.81
AGRN-208ENST00000479707 GJA1P17302 382 aa20.11■□□□□ 0.81
AGRN-208ENST00000479707 CCR2P41597 374 aa20.11■□□□□ 0.81
AGRN-208ENST00000479707 MAPRE1Q15691 268 aaKnown RBP20.11■□□□□ 0.81
AGRN-208ENST00000479707 TAF12Q16514 161 aa20.11■□□□□ 0.81
AGRN-208ENST00000479707 STX1AQ16623 288 aa20.11■□□□□ 0.81
AGRN-208ENST00000479707 CT47A1Q5JQC4 288 aaPredicted RBP20.11■□□□□ 0.81
AGRN-208ENST00000479707 CYP4A22Q5TCH4 519 aa20.11■□□□□ 0.81
AGRN-208ENST00000479707 PDZD4Q76G19 769 aaPredicted RBP20.11■□□□□ 0.81
AGRN-208ENST00000479707 DNAJB7Q7Z6W7 309 aaPredicted RBP20.11■□□□□ 0.81
AGRN-208ENST00000479707 THAP9Q9H5L6 903 aa20.11■□□□□ 0.81
AGRN-208ENST00000479707 CYP3A43Q9HB55 503 aa20.11■□□□□ 0.81
AGRN-208ENST00000479707 ASAH2Q9NR71 780 aa20.11■□□□□ 0.81
AGRN-208ENST00000479707 SAMSN1Q9NSI8 373 aaKnown RBP20.11■□□□□ 0.81
AGRN-208ENST00000479707 DOCK8Q8NF50 2099 aa20.11■□□□□ 0.81
AGRN-208ENST00000479707 CLDN5O00501 218 aa20.1■□□□□ 0.81
AGRN-208ENST00000479707 CETN1Q12798 172 aa20.1■□□□□ 0.81
AGRN-208ENST00000479707 VEPH1Q14D04 833 aa20.1■□□□□ 0.81
AGRN-208ENST00000479707 CFAP221Q4G0U5 840 aa20.1■□□□□ 0.81
AGRN-208ENST00000479707 ZNF394Q53GI3 561 aa20.1■□□□□ 0.81
AGRN-208ENST00000479707 PLCD3Q8N3E9 789 aa20.1■□□□□ 0.81
AGRN-208ENST00000479707 FGF13Q92913 245 aa20.1■□□□□ 0.81
AGRN-208ENST00000479707 MCRS1Q96EZ8 462 aa20.1■□□□□ 0.81
AGRN-208ENST00000479707 TNIP3Q96KP6 325 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms