RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 UNQ6494/PRO21346Q6UXR6 183 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 ZPBP2Q6X784 338 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 HAUS6Q7Z4H7 955 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 RALGPS2Q86X27 583 aaPredicted RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 DAW1Q8N136 415 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 ELMOD1Q8N336 334 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 PDCL2Q8N4E4 241 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 KRI1Q8N9T8 703 aaKnown RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 KDF1Q8NAX2 398 aaPredicted RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 APPL2Q8NEU8 664 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 CSGALNACT1Q8TDX6 532 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 ANKRD7Q92527 254 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 DDX12PQ92771 950 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 EZH1Q92800 747 aaPredicted RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 LOXL4Q96JB6 756 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 ZNF512Q96ME7 567 aaPredicted RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 PGLYRP2Q96PD5 576 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 PNMA5Q96PV4 448 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 TMEM209Q96SK2 561 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 NTPCRQ9BSD7 190 aaKnown RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 MMTAG2Q9BU76 263 aaKnown RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 SMG9Q9H0W8 520 aaKnown RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 C8orf33Q9H7E9 229 aaPredicted RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 PARVGQ9HBI0 331 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 FBRSL1Q9HCM7 1045 aaKnown RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 SPTLC3Q9NUV7 552 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 OGFRQ9NZT2 677 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 CNTN3Q9P232 1028 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 ARHGAP28Q9P2N2 729 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 TUBGCP4Q9UGJ1 667 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 TIMM13Q9Y5L4 95 aaPredicted RBP7.2□□□□□ -1.26
VCP-205ENST00000479300 IGSF10Q6WRI0 2623 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 FREM2Q5SZK8 3169 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 ATG2BQ96BY7 2078 aa7.2□□□□□ -1.26
VCP-205ENST00000479300 ANTXRLA6NF34 631 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 HNRNPDLO14979 420 aaKnown RBP7.19□□□□□ -1.26
VCP-205ENST00000479300 DCLK1O15075 740 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 FOXD2O60548 495 aaPredicted RBP7.19□□□□□ -1.26
VCP-205ENST00000479300 OAZ2O95190 189 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 MBD3O95983 291 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 MAPTP10636 758 aaKnown RBP7.19□□□□□ -1.26
VCP-205ENST00000479300 MPLP40238 635 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 CDR1P51861 262 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 SLC12A3P55017 1021 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 DUSP4Q13115 394 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 MAPK7Q13164 816 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 SLC10A6Q3KNW5 377 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 PLK5Q496M5 336 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 TMEM119Q4V9L6 283 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 SEZ6Q53EL9 994 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 TMEM196Q5HYL7 178 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 IQCEQ6IPM2 695 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 ZNF280DQ6N043 979 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 DSTYKQ6XUX3 929 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 CACNA2D4Q7Z3S7 1137 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 KCNK18Q7Z418 384 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 USP37Q86T82 979 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 C12orf50Q8NA57 414 aaPredicted RBP7.19□□□□□ -1.26
VCP-205ENST00000479300 ATAD1Q8NBU5 361 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 LEMD2Q8NC56 503 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 LARP4BQ92615 738 aaKnown RBP7.19□□□□□ -1.26
VCP-205ENST00000479300 RAD54LQ92698 747 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 GATA6Q92908 595 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 MSANTD3Q96H12 275 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 ZBTB45Q96K62 511 aaPredicted RBP7.19□□□□□ -1.26
VCP-205ENST00000479300 ZC3H10Q96K80 434 aaKnown RBP7.19□□□□□ -1.26
VCP-205ENST00000479300 TSPAN18Q96SJ8 248 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 HAPLN2Q9GZV7 340 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 DUSP15Q9H1R2 295 aaPredicted RBP7.19□□□□□ -1.26
VCP-205ENST00000479300 KDM4CQ9H3R0 1056 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 ZSCAN16Q9H4T2 348 aaPredicted RBP7.19□□□□□ -1.26
VCP-205ENST00000479300 SLITRK6Q9H5Y7 841 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 RPF1Q9H9Y2 349 aaKnown RBP7.19□□□□□ -1.26
VCP-205ENST00000479300 PLEKHA5Q9HAU0 1116 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 IL21Q9HBE4 155 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 HPS4Q9NQG7 708 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 LMBRD1Q9NUN5 540 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 EXOC7Q9UPT5 735 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 SLC27A5Q9Y2P5 690 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 TSC2P49815 1807 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 KIAA1549LQ6ZVL6 1849 aa7.19□□□□□ -1.26
VCP-205ENST00000479300 MYO16Q9Y6X6 1858 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 CCDC163A0A0D9SF12 145 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 NPHP3-ACAD11A0A0J9YXS1 232 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 LNP1A1A4G5 178 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 SRRM3A6NNA2 597 aaPredicted RBP7.18□□□□□ -1.26
VCP-205ENST00000479300 C4orf47A7E2U8 309 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 M0QZQ0 153 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 PPEF2O14830 753 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 OGTO15294 1046 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 CD2BP2O95400 341 aaKnown RBP7.18□□□□□ -1.26
VCP-205ENST00000479300 EGFP01133 1207 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 CPB1P15086 417 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 PLCG1P19174 1290 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 PAX3P23760 479 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 AARSP49588 968 aaKnown RBP eCLIP7.18□□□□□ -1.26
VCP-205ENST00000479300 NOVA1P51513 510 aaKnown RBP7.18□□□□□ -1.26
VCP-205ENST00000479300 GUCY2FP51841 1108 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 NCKAP1LP55160 1127 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 CYP4F8P98187 520 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms