RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 LRSAM1Q6UWE0 723 aa16.24■□□□□ 0.19
COL16A1-211ENST00000479100 LUZP1Q86V48 1076 aa16.24■□□□□ 0.19
COL16A1-211ENST00000479100 LRRTM3Q86VH5 581 aa16.24■□□□□ 0.19
COL16A1-211ENST00000479100 SLC7A14Q8TBB6 771 aa16.24■□□□□ 0.19
COL16A1-211ENST00000479100 BCO2Q9BYV7 579 aa16.24■□□□□ 0.19
COL16A1-211ENST00000479100 CYP3A43Q9HB55 503 aa16.24■□□□□ 0.19
COL16A1-211ENST00000479100 GTF3C4Q9UKN8 822 aa16.24■□□□□ 0.19
COL16A1-211ENST00000479100 CDH9Q9ULB4 789 aa16.24■□□□□ 0.19
COL16A1-211ENST00000479100 TSC2P49815 1807 aa16.24■□□□□ 0.19
COL16A1-211ENST00000479100 GOLGA6L19H0YKK7 550 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 RFPL2O75678 378 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 SEC24AO95486 1093 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 C1RP00736 705 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 C8AP07357 584 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 ATF2P15336 505 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 SLC9A1P19634 815 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 COPB1P53618 953 aaKnown RBP16.23■□□□□ 0.19
COL16A1-211ENST00000479100 ORC1Q13415 861 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 CUL2Q13617 745 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 EXOC3L4Q17RC7 722 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 PPM1LQ5SGD2 360 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 SYCE2Q6PIF2 218 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 TMC5Q6UXY8 1006 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 CCDC149Q6ZUS6 474 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 PPM1KQ8N3J5 372 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 ATAD1Q8NBU5 361 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 LMO3Q8TAP4 145 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 HDAC7Q8WUI4 952 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 SUSD6Q92537 303 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 ARID3AQ99856 593 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 LPIN3Q9BQK8 851 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 DPEP3Q9H4B8 488 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 SFXN1Q9H9B4 322 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 TMLHEQ9NVH6 421 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 ABI2Q9NYB9 513 aaPredicted RBP16.23■□□□□ 0.19
COL16A1-211ENST00000479100 LIMA1Q9UHB6 759 aaKnown RBP16.23■□□□□ 0.19
COL16A1-211ENST00000479100 SLC27A5Q9Y2P5 690 aa16.23■□□□□ 0.19
COL16A1-211ENST00000479100 PLXNA3P51805 1871 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 CCDC195A0A1B0GUA6 201 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 MYBPHLA2RUH7 354 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 MTMR11A4FU01 709 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 ATP1A3P13637 1013 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 ZNF18P17022 549 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 HOXB8P17481 243 aaPredicted RBP16.22■□□□□ 0.19
COL16A1-211ENST00000479100 PTPN1P18031 435 aaKnown RBP16.22■□□□□ 0.19
COL16A1-211ENST00000479100 NDST1P52848 882 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 DUSP4Q13115 394 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 CBX2Q14781 532 aaPredicted RBP16.22■□□□□ 0.19
COL16A1-211ENST00000479100 NFE2Q16621 373 aaPredicted RBP16.22■□□□□ 0.19
COL16A1-211ENST00000479100 CCDC142Q17RM4 750 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 MDH1BQ5I0G3 518 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 FKBP15Q5T1M5 1219 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 RRAGAQ7L523 313 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 ACOT1Q86TX2 421 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 ARHGEF19Q8IW93 802 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 FAM200AQ8TCP9 573 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 HSD3B7Q9H2F3 369 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 CRTAC1Q9NQ79 661 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 CISHQ9NSE2 258 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 HMGXB4Q9UGU5 601 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 USP15Q9Y4E8 981 aaPredicted RBP16.22■□□□□ 0.19
COL16A1-211ENST00000479100 NME7Q9Y5B8 376 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 PCDHB5Q9Y5E4 795 aa16.22■□□□□ 0.19
COL16A1-211ENST00000479100 GTPBP10A4D1E9 387 aaKnown RBP16.21■□□□□ 0.19
COL16A1-211ENST00000479100 LOC730098B7Z3J9 87 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 CCL16O15467 120 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 ZMYND10O75800 440 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 VNN2O95498 520 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 TRIM21P19474 475 aaKnown RBP16.21■□□□□ 0.19
COL16A1-211ENST00000479100 TBXAS1P24557 533 aaPredicted RBP16.21■□□□□ 0.19
COL16A1-211ENST00000479100 YWHAEP62258 255 aaKnown RBP16.21■□□□□ 0.19
COL16A1-211ENST00000479100 CYP27A1Q02318 531 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 MGAT5BQ3V5L5 792 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 ZNF394Q53GI3 561 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 CES5AQ6NT32 575 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 UNC93AQ86WB7 457 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 RNF135Q8IUD6 432 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 SPATA2LQ8IUW3 424 aaPredicted RBP16.21■□□□□ 0.19
COL16A1-211ENST00000479100 TCEAL8Q8IYN2 117 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 TTC9BQ8N6N2 239 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 B3GALNT2Q8NCR0 500 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 KAT5Q92993 513 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 FAXDC2Q96IV6 333 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 TNIP3Q96KP6 325 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 SEPT5Q99719 369 aaPredicted RBP16.21■□□□□ 0.19
COL16A1-211ENST00000479100 DNAI2Q9GZS0 605 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 S1PR5Q9H228 398 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 PIDD1Q9HB75 910 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 UBE2TQ9NPD8 197 aaPredicted RBP16.21■□□□□ 0.19
COL16A1-211ENST00000479100 MUTYHQ9UIF7 546 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 HCN4Q9Y3Q4 1203 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 INSL5Q9Y5Q6 135 aa16.21■□□□□ 0.19
COL16A1-211ENST00000479100 SOAT2O75908 522 aa16.2■□□□□ 0.18
COL16A1-211ENST00000479100 LRG1P02750 347 aa16.2■□□□□ 0.18
COL16A1-211ENST00000479100 PON1P27169 355 aa16.2■□□□□ 0.18
COL16A1-211ENST00000479100 APBA1Q02410 837 aa16.2■□□□□ 0.18
COL16A1-211ENST00000479100 INCA1Q0VD86 236 aa16.2■□□□□ 0.18
COL16A1-211ENST00000479100 SMARCB1Q12824 385 aa16.2■□□□□ 0.18
COL16A1-211ENST00000479100 MAPRE1Q15691 268 aaKnown RBP16.2■□□□□ 0.18
COL16A1-211ENST00000479100 UVSSAQ2YD98 709 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms