RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 LHX1P48742 406 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 CACNA2D1P54289 1103 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 CDR2Q01850 454 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 ELAVL2Q12926 359 aaKnown RBP13.94□□□□□ -0.18
CHD3-210ENST00000479080 PKDCCQ504Y2 493 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 TDRD12Q587J7 1177 aaKnown RBP13.94□□□□□ -0.18
CHD3-210ENST00000479080 MDH1BQ5I0G3 518 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 ARHGAP17Q68EM7 881 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 DENND1BQ6P3S1 775 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 TTC30AQ86WT1 665 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 CEP57Q86XR8 500 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 GLYCTKQ8IVS8 523 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 FUKQ8N0W3 1084 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 TTC39CQ8N584 583 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 WDTC1Q8N5D0 677 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 SPPL3Q8TCT6 385 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 MYLPFQ96A32 169 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 ACBD6Q9BR61 282 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 B3GNT5Q9BYG0 378 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 RHOBTB2Q9BYZ6 727 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 ZCWPW1Q9H0M4 648 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 NHEJ1Q9H9Q4 299 aaPredicted RBP13.94□□□□□ -0.18
CHD3-210ENST00000479080 ALG13Q9NP73 1137 aaKnown RBP13.94□□□□□ -0.18
CHD3-210ENST00000479080 SPTLC3Q9NUV7 552 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.94□□□□□ -0.18
CHD3-210ENST00000479080 MTRRQ9UBK8 725 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 CYTH4Q9UIA0 394 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 DSEQ9UL01 958 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 CDH9Q9ULB4 789 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 MTUS1Q9ULD2 1270 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHD3-210ENST00000479080 PCDHB12Q9Y5F1 795 aa13.94□□□□□ -0.18
CHD3-210ENST00000479080 A0A0U1RQJ8 604 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 TULP2O00295 520 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 GRM6O15303 877 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 THAP12O43422 761 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 MICAL2O94851 1124 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 CYP1A1P04798 512 aaPredicted RBP13.93□□□□□ -0.18
CHD3-210ENST00000479080 VDRP11473 427 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 CD19P15391 556 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 GLUD2P49448 558 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 PDE6CP51160 858 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 ERVFC1P60507 584 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 PTPN14Q15678 1187 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 USP41Q3LFD5 358 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 CYP26C1Q6V0L0 522 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 TOGARAM2Q6ZUX3 1019 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 METTL23Q86XA0 190 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 VPS52Q8N1B4 723 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 ATRIPQ8WXE1 791 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 RIN2Q8WYP3 895 aaPredicted RBP13.93□□□□□ -0.18
CHD3-210ENST00000479080 CLSTN3Q9BQT9 956 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 CRISPLD1Q9H336 500 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 AAASQ9NRG9 546 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 GTF3C4Q9UKN8 822 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 PCDHGC3Q9UN70 934 aa13.93□□□□□ -0.18
CHD3-210ENST00000479080 FSCN2O14926 492 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 GABBR2O75899 941 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 LCA5LO95447 670 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 CTSAP10619 480 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 UNGP13051 313 aaPredicted RBP13.92□□□□□ -0.18
CHD3-210ENST00000479080 IRS1P35568 1242 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 KIF11P52732 1056 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 NOMO3P69849 1222 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 GFPT1Q06210 699 aaPredicted RBP13.92□□□□□ -0.18
CHD3-210ENST00000479080 PSMD5Q16401 504 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 GOLGA7BQ2TAP0 167 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 CTXN3Q4LDR2 81 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 SGO2Q562F6 1265 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 SLC8B1Q6J4K2 584 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 ZNF280DQ6N043 979 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 LCLAT1Q6UWP7 414 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 TMTC1Q8IUR5 882 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 PASD1Q8IV76 773 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 TTC9BQ8N6N2 239 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 ACRBPQ8NEB7 543 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 ZMIZ2Q8NF64 920 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 MYCBPAPQ8TBZ2 947 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 SLC2A14Q8TDB8 520 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 CYFIP2Q96F07 1278 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 PCED1BQ96HM7 432 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 HEXIM2Q96MH2 286 aaKnown RBP13.92□□□□□ -0.18
CHD3-210ENST00000479080 TGS1Q96RS0 853 aaKnown RBP13.92□□□□□ -0.18
CHD3-210ENST00000479080 HNRNPABQ99729 332 aaKnown RBP13.92□□□□□ -0.18
CHD3-210ENST00000479080 DESI2Q9BSY9 194 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 PLVAPQ9BX97 442 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 ZNF518BQ9C0D4 1074 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 CERS4Q9HA82 394 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 RXFP1Q9HBX9 757 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 TJP2Q9UDY2 1190 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 ADAMTS1Q9UHI8 967 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 PUF60Q9UHX1 559 aaKnown RBP13.92□□□□□ -0.18
CHD3-210ENST00000479080 TSPAN16Q9UKR8 245 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 BACE2Q9Y5Z0 518 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 ATG2AQ2TAZ0 1938 aa13.92□□□□□ -0.18
CHD3-210ENST00000479080 COL4A4P53420 1690 aaPredicted RBP13.91□□□□□ -0.18
CHD3-210ENST00000479080 ARHGEF37A1IGU5 675 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 WDR27A2RRH5 827 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 RCCD1A6NED2 376 aa13.91□□□□□ -0.18
CHD3-210ENST00000479080 OR6C75A6NL08 312 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms