RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 CHKBQ9Y259 395 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 SPO11Q9Y5K1 396 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 PCNTO95613 3336 aa11.62□□□□□ -0.55
LRRFIP1-211ENST00000478958 NFIBO00712 420 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 LMNAP02545 664 aaKnown RBP11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 CCNB1P14635 433 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 VAV1P15498 845 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 EPHB2P29323 1055 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 SKIV2L2P42285 1042 aaKnown RBP11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 VPS72Q15906 364 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 PPP1R21Q6ZMI0 780 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 MCOLN2Q8IZK6 566 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 FAM13CQ8NE31 585 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 TTC8Q8TAM2 541 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 SRPK1Q96SB4 655 aaKnown RBP11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 MXRA8Q9BRK3 442 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 OSBPL8Q9BZF1 889 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 DCLRE1BQ9H816 532 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 TXLNGQ9NUQ3 528 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 COL20A1Q9P218 1284 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 DCTN4Q9UJW0 460 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 MRPL11Q9Y3B7 192 aaKnown RBP11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 GOLGA8RI6L899 631 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 MAGEB3O15480 346 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 TCF4P15884 667 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 EIF2AK2P19525 551 aaKnown RBP11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 STIP1P31948 543 aaKnown RBP11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 RPA3P35244 121 aaPredicted RBP11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 QARSP47897 775 aaKnown RBP11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 GALK1P51570 392 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 NOP14P78316 857 aaKnown RBP11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 OVGP1Q12889 678 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 PCNX4Q63HM2 1172 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 ANKMY2Q8IV38 441 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 CDAN1Q8IWY9 1227 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 NAT14Q8WUY8 206 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 C7orf43Q8WVR3 580 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 KLF6Q99612 283 aaPredicted RBP11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 FAM213AQ9BRX8 229 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 IDI2Q9BXS1 227 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 TRABDQ9H4I3 376 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 C10orf88Q9H8K7 445 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 GRID1Q9ULK0 1009 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 KIF13BQ9NQT8 1826 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 SPATA31A6Q5VVP1 1343 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 A0A1W2PPM1 405 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 DYTNA2CJ06 578 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 HNRNPDLO14979 420 aaKnown RBP11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 ENTPD5O75356 428 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 LYNP07948 512 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 FDX1P10109 184 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 RCN1Q15293 331 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 TMEM259Q4ZIN3 620 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 SH3D19Q5HYK7 790 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 SNX30Q5VWJ9 437 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 ZBED8Q8IZ13 594 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 AGGF1Q8N302 714 aaeCLIP11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 CCDC89Q8N998 374 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 PPFIBP2Q8ND30 876 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 SNX27Q96L92 541 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 EHMT1Q9H9B1 1298 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 USP21Q9UK80 565 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 CCPG1Q9ULG6 757 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 NEU2Q9Y3R4 380 aa11.61□□□□□ -0.55
LRRFIP1-211ENST00000478958 A6NJR5 290 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 SIGLEC16A6NMB1 481 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 ASMTLO95671 621 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 PORP16435 677 aaPredicted RBP11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 ERFP50548 548 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 PDE1BQ01064 536 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 LMNB2Q03252 620 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 TCEAL1Q15170 157 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 WASHC2DQ5SRD0 308 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 NME8Q8N427 588 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 RIBC1Q8N443 379 aaPredicted RBP11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 FBXO41Q8TF61 875 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 CCDC28BQ9BUN5 200 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 OSBPL10Q9BXB5 764 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 KIAA1586Q9HCI6 787 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 TMEM8AQ9HCN3 771 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 NPHS2Q9NP85 383 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 DNPEPQ9ULA0 475 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 TBX20Q9UMR3 447 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 HEY1Q9Y5J3 304 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 ECE2O60344 883 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 TNNI1P19237 187 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 NPTX2P47972 431 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 POLGP54098 1239 aaPredicted RBP11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 GTF2BQ00403 316 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 OCRLQ01968 901 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 GPS1Q13098 491 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 TTLL12Q14166 644 aaPredicted RBP11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 STAT4Q14765 748 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 SLC1A5Q15758 541 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 GSTA3Q16772 222 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 RNF43Q68DV7 783 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 SLC2A7Q6PXP3 512 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 PODNQ7Z5L7 613 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 KCTD17Q8N5Z5 321 aa11.6□□□□□ -0.55
LRRFIP1-211ENST00000478958 VTI1AQ96AJ9 217 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms