RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 MTMR12Q9C0I1 747 aa16.99■□□□□ 0.31
GARNL3-215ENST00000478702 LMAN1LQ9HAT1 526 aa16.99■□□□□ 0.31
GARNL3-215ENST00000478702 ITGA11Q9UKX5 1188 aa16.99■□□□□ 0.31
GARNL3-215ENST00000478702 CDV3Q9UKY7 258 aaKnown RBP16.99■□□□□ 0.31
GARNL3-215ENST00000478702 CIZ1Q9ULV3 898 aaPredicted RBP16.99■□□□□ 0.31
GARNL3-215ENST00000478702 OR6C75A6NL08 312 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 CLIC2O15247 247 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 RHOBTB3O94955 611 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 VNN2O95498 520 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 ITGB3P05106 788 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 TMEM191BP0C7N4 346 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 CHRNB1P11230 501 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 CPB1P15086 417 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 POLR2BP30876 1174 aaKnown RBP16.98■□□□□ 0.31
GARNL3-215ENST00000478702 PNPLA4P41247 253 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 CYP2J2P51589 502 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 SPEM2Q0P670 501 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 TWF1Q12792 350 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 SNRNP35Q16560 246 aaKnown RBP16.98■□□□□ 0.31
GARNL3-215ENST00000478702 WDR44Q5JSH3 913 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 RNF19BQ6ZMZ0 732 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 FMR1NBQ8N0W7 255 aaPredicted RBP16.98■□□□□ 0.31
GARNL3-215ENST00000478702 XXYLT1Q8NBI6 393 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 GOLGA5Q8TBA6 731 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 CACTINQ8WUQ7 758 aaKnown RBP16.98■□□□□ 0.31
GARNL3-215ENST00000478702 RSPRY1Q96DX4 576 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 RTKNQ9BST9 563 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 TRPV4Q9HBA0 871 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 INTS13Q9NVM9 706 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 AFF4Q9UHB7 1163 aaKnown RBP16.98■□□□□ 0.31
GARNL3-215ENST00000478702 GMEB2Q9UKD1 530 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 PIAS3Q9Y6X2 628 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 SDK1Q7Z5N4 2213 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 PTPRDP23468 1912 aa16.98■□□□□ 0.31
GARNL3-215ENST00000478702 MYL4P12829 197 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 SATB1Q01826 763 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 CYP24A1Q07973 514 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 MYBPC2Q14324 1141 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 SURF1Q15526 300 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 TEAD2Q15562 447 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 CYP4A22Q5TCH4 519 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 LMBRD2Q68DH5 695 aaPredicted RBP16.97■□□□□ 0.31
GARNL3-215ENST00000478702 WDR49Q8IV35 697 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 LRRC52Q8N7C0 313 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 ZSCAN18Q8TBC5 510 aaPredicted RBP16.97■□□□□ 0.31
GARNL3-215ENST00000478702 DEPDC1BQ8WUY9 529 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 CCDC47Q96A33 483 aaKnown RBP16.97■□□□□ 0.31
GARNL3-215ENST00000478702 ZNF512Q96ME7 567 aaPredicted RBP16.97■□□□□ 0.31
GARNL3-215ENST00000478702 IER2Q9BTL4 223 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 LRRC3Q9BY71 257 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 KCTD10Q9H3F6 313 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 SIX4Q9UIU6 781 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 DSEQ9UL01 958 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 MAFFQ9ULX9 164 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.97■□□□□ 0.31
GARNL3-215ENST00000478702 MYO16Q9Y6X6 1858 aa16.97■□□□□ 0.31
GARNL3-215ENST00000478702 GOLGA6L4A6NEF3 574 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 HEPACAM2A8MVW5 462 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 KPNA7A9QM74 516 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 CCNE1P24864 410 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 CCR3P51677 355 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 NRLP54845 237 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 DMWDQ09019 674 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 PSMD6Q15008 389 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 IQCEQ6IPM2 695 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 MFSD6LQ8IWD5 586 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 CELF5Q8N6W0 485 aaKnown RBP16.96■□□□□ 0.31
GARNL3-215ENST00000478702 OR5B17Q8NGF7 314 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 OR10T2Q8NGX3 314 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 SHKBP1Q8TBC3 707 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 TMEM174Q8WUU8 243 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 CCDC34Q96HJ3 373 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 ANKRD36BP1Q96IX9 119 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 CGRRF1Q99675 332 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 CRISPLD1Q9H336 500 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 AGAP1Q9UPQ3 857 aa16.96■□□□□ 0.31
GARNL3-215ENST00000478702 CHD8Q9HCK8 2581 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 CNOT1A5YKK6 2376 aaKnown RBP16.95■□□□□ 0.3
GARNL3-215ENST00000478702 CYB561D2O14569 222 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 ZNF263O14978 683 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 TNNC2P02585 160 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 OR4Q2P0C623 313 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 FAM160A1Q05DH4 1040 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 BFSP1Q12934 665 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 KCNB1Q14721 858 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 LAIR1Q6GTX8 287 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 TMC8Q8IU68 726 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 ELMOD1Q8N336 334 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 LEMD2Q8NC56 503 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 ENGASEQ8NFI3 743 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 GZF1Q9H116 711 aaPredicted RBP16.95■□□□□ 0.3
GARNL3-215ENST00000478702 DNAJC25Q9H1X3 360 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 ASAH2Q9NR71 780 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 YIPF1Q9Y548 306 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 KIAA1549LQ6ZVL6 1849 aa16.95■□□□□ 0.3
GARNL3-215ENST00000478702 TULP1O00294 542 aaPredicted RBP16.94■□□□□ 0.3
GARNL3-215ENST00000478702 PDXKO00764 312 aa16.94■□□□□ 0.3
GARNL3-215ENST00000478702 HRO43593 1189 aa16.94■□□□□ 0.3
GARNL3-215ENST00000478702 EXOC3O60645 756 aa16.94■□□□□ 0.3
GARNL3-215ENST00000478702 ADRB1P08588 477 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms